DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and CG17806

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_650658.1 Gene:CG17806 / 42142 FlyBaseID:FBgn0038548 Length:421 Species:Drosophila melanogaster


Alignment Length:328 Identity:79/328 - (24%)
Similarity:117/328 - (35%) Gaps:110/328 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 PQLKKSARK-----GEPVKRKHHVCSQ-CSKEFGGKTDLQRHMLIHSDERPHKCKDCGKSYRQAV 134
            ||:.|...:     ||..|.:....|: |.:|..|| |:.:  :.:.|...:|.|:...:.|...
  Fly   185 PQVMKEEPRTLQVIGEVQKNRRKPRSKGCLEECPGK-DMAK--IENIDSTTNKTKEEKYATRNKW 246

  Fly   135 NLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHSGEKPYPCDLCDKKFARGGQLQQHMVS 199
            ..... ..|.|||..| |.||.|:|:.|....:|:|.|.|.|.:.|..||:.     :..||:: 
  Fly   247 GAAKR-AYALEHRLYF-CDQCGKTFSEKGNFNVHLRRHKGTKEFQCQECDRM-----EFTQHLL- 303

  Fly   200 HHKTSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRCSICENQFANELALRAHINQEHHKLTQ 264
                                  ||.|.: :|...:.:.|..|..:|.|                 
  Fly   304 ----------------------NLHVRI-KHRGELPYVCKYCGKRFDN----------------- 328

  Fly   265 FECEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHMRMHTGERPYQCRICHQT 329
                 |.|.:       .|.:.|.....|                         ||:.|..|.:.
  Fly   329 -----CLKRL-------NHERNHKESPVH-------------------------RPHVCSTCQKA 356

  Fly   330 FAHSSVLKLHIRKHTGEKPFRCQLCEDEVAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFFKIKVE 394
            |..|:.||.||..||||:||.|:||  :..|::...|..|.|..|              .::|||
  Fly   357 FKTSTALKDHIVVHTGEQPFHCELC--QTFFNRRNALATHYKSKH--------------HRLKVE 405

  Fly   395 LQS 397
            .||
  Fly   406 EQS 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 39/159 (25%)
C2H2 Zn finger 95..115 CDD:275368 6/20 (30%)
C2H2 Zn finger 123..144 CDD:275368 2/20 (10%)
C2H2 Zn finger 152..172 CDD:275368 8/19 (42%)
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
COG5048 <192..369 CDD:227381 36/176 (20%)
C2H2 Zn finger 210..230 CDD:275370 3/19 (16%)
C2H2 Zn finger 238..260 CDD:275371 4/21 (19%)
C2H2 Zn finger 267..287 CDD:275368 3/19 (16%)
C2H2 Zn finger 295..315 CDD:275368 0/19 (0%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..374 CDD:275368 7/22 (32%)
C2H2 Zn finger 382..399 CDD:275368 5/16 (31%)
CG17806NP_650658.1 zf-AD 4..75 CDD:462262
zf-C2H2 260..282 CDD:395048 9/22 (41%)
C2H2 Zn finger 262..282 CDD:275368 8/19 (42%)
C2H2 Zn finger 290..311 CDD:275368 8/49 (16%)
C2H2 Zn finger 319..339 CDD:275368 7/48 (15%)
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
ZnF_U1 375..407 CDD:197732 13/47 (28%)
C2H2 Zn finger 378..396 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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