DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and CG18476

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_731615.1 Gene:CG18476 / 41404 FlyBaseID:FBgn0037931 Length:936 Species:Drosophila melanogaster


Alignment Length:561 Identity:121/561 - (21%)
Similarity:182/561 - (32%) Gaps:231/561 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 VDEEEDDGGEQDSKDDDYVQPQLKKSARKG--------EPVKRKH----------------HVCS 96
            :|..|.| .:.|...||  |.:.:|.:||.        :...||:                |||.
  Fly   371 LDSSETD-SDLDGDHDD--QHKRRKKSRKATYSCELCQQKFPRKYQLYDHQRQSHSWSDAPHVCG 432

  Fly    97 QCSKEFGGKTDLQRHMLIHSD------ERPHKCKDCGKSYRQAVNLKNHITTAHEHR---KQFVC 152
            :|...| ....|.||   |::      ::...|..|...:|...|||.|.   .|||   :.|.|
  Fly   433 RCDGRF-VSLQLLRH---HNESQCRNAQKRFLCHKCPLRFRWKHNLKTHF---REHRITNQTFEC 490

  Fly   153 SQCPKSFALKERLRLH-MRLHSGE-KPYPCDLCDKKFARGGQLQQHMVSH--------------- 200
            |:|.:.|..|:.|.:| :.:|:.| |..||..|.:||.|...|.:|:..|               
  Fly   491 SECKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRHDYLVKHLKRHGLKEHDIPLAETLIA 555

  Fly   201 ----------------------------------------------------------------- 200
                                                                             
  Fly   556 ATSRPNGAKRITCRMCNLHFERIVDLRAHIQLELKLSLSLHQSYDSPHNYSITNESGFELQLEDS 620

  Fly   201 ---------------------------------HKTSIQQFN----------------------- 209
                                             |:.::.:|:                       
  Fly   621 ETEDEMQPGVGSRPVYICELCSVQCKRKFEMIQHQRTMHRFDKMPHECDDCIFKCVSKSIMDHHR 685

  Fly   210 ------------CTKCSASFSTNANLRVHM--------------ERHEQG---MEH--------- 236
                        |.|||..|....||..|:              :||.||   :|.         
  Fly   686 QGQCSSTEKKHACGKCSYKFMWPENLEQHILLQHSKSSVSNPTGDRHTQGTGDLEKDATEDGIPL 750

  Fly   237 -RCSICENQFANELALRAHINQEH--------HKLTQFECEICHKMIEPDEDLATHMQRHTAVKT 292
             :|..|:..:..:..|..||...|        ..:.:|.|.:|.........|.|||:|||..|.
  Fly   751 LQCPHCDRTYQMKSRLNNHIRDVHINGDRKRKEAIKRFLCSLCGMETRSAAALVTHMRRHTGEKP 815

  Fly   293 HVCEVCNTYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRKHTGEKPFRCQLCEDE 357
            ..|::|...|.:.|:...|.||||||:|:.|.:|.:.||.|..||.|:..|:|.||.:|..||. 
  Fly   816 FKCDLCEMAFPRHSELASHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCEK- 879

  Fly   358 VAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFFKIKVELQSH 398
             ::.|...||.|::: |..:.|::|..|.:.|.....|:.|
  Fly   880 -SYRQAKDLKLHLQQ-HTGECPFVCGTCGERFIQSSTLEKH 918

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 58/360 (16%)
C2H2 Zn finger 95..115 CDD:275368 6/19 (32%)
C2H2 Zn finger 123..144 CDD:275368 7/20 (35%)
C2H2 Zn finger 152..172 CDD:275368 7/20 (35%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
COG5048 <192..369 CDD:227381 65/359 (18%)
C2H2 Zn finger 210..230 CDD:275370 8/33 (24%)
C2H2 Zn finger 238..260 CDD:275371 6/29 (21%)
C2H2 Zn finger 267..287 CDD:275368 6/19 (32%)
C2H2 Zn finger 295..315 CDD:275368 6/19 (32%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..374 CDD:275368 7/22 (32%)
C2H2 Zn finger 382..399 CDD:275368 5/17 (29%)
CG18476NP_731615.1 C2H2 Zn finger 206..227 CDD:275368
C2H2 Zn finger 236..256 CDD:275368
C2H2 Zn finger 401..422 CDD:275368 2/20 (10%)
C2H2 Zn finger 431..447 CDD:275368 6/19 (32%)
C2H2 Zn finger 461..481 CDD:275368 7/22 (32%)
C2H2 Zn finger 490..511 CDD:275368 7/20 (35%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 638..659 CDD:275368 1/20 (5%)
C2H2 Zn finger 668..690 CDD:275368 0/21 (0%)
C2H2 Zn finger 698..715 CDD:275368 7/16 (44%)
C2H2 Zn finger 753..774 CDD:275368 5/20 (25%)
C2H2 Zn finger 790..810 CDD:275368 6/19 (32%)
COG5048 814..>886 CDD:227381 29/73 (40%)
C2H2 Zn finger 818..838 CDD:275368 6/19 (32%)
C2H2 Zn finger 846..866 CDD:275368 8/19 (42%)
C2H2 Zn finger 874..894 CDD:275368 7/22 (32%)
C2H2 Zn finger 902..924 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

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