DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and CG8301

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster


Alignment Length:516 Identity:121/516 - (23%)
Similarity:197/516 - (38%) Gaps:124/516 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KEDAVSLLTDSGISLSSPPAARE------SSPGPTLAIKRRKSSLAS-----LRDAC----VDEE 59
            |.|| |.|.|..|.......|.|      :.|..|::.:.:.::.||     ..||.    .:||
  Fly    93 KIDA-SSLEDDEIGQEDLEPAEEHQETETTKPTTTVSAETQPNNTASDPIEIFVDAVDIDEAEEE 156

  Fly    60 EDDGGEQDSKDDDYVQPQLKKSARKG------------------------EPVKRKH-----HVC 95
            |::..:|...|::..:|...:||...                        |.:...|     :.|
  Fly   157 EEEEEQQQQYDEEVEEPITDESAPPQLTISYACKFCLRPQENYQLQQLLLEHINASHDPEQPYNC 221

  Fly    96 SQCSKEFGGKTDLQRHMLIHSDERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFA 160
            .:|...|........|:.....|:.|.|..|||.|....||::|:...|. ...|.|:.|.|.|.
  Fly   222 PECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHS-ETDFECALCEKRFY 285

  Fly   161 LKERLRLHMRLHSGEKPYPC--DLCDKKFARGGQLQQHMVSHHKTSIQQ---------------- 207
            .::.|..||:.|:.::.:.|  ..|::.|.....|..|..:|..||.::                
  Fly   286 TRKSLNYHMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGFCGKTFIHLKT 350

  Fly   208 --------------FNCTKCSASFSTNANLRVHM-ERHEQGM----EHRCSICENQFANELALRA 253
                          :.|..|:..|::.|..|:|| |||.:.:    ...|.:|...|::|..|..
  Fly   351 LRWHIYRQHGGEKPYKCANCTEVFASYAEKRIHMLERHRENLTAIERSECMLCRQPFSSEPDLIH 415

  Fly   254 HINQEH-------------HKLTQ---------FECEICHKMIEPDEDLATHMQRHTAV-----K 291
            |::.||             ..|.|         |:|..|.:..    ::.:.::||.||     :
  Fly   416 HMSAEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRF----NMKSALERHAAVHSEKDR 476

  Fly   292 THVCEVCNTYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRKH-TGEKPFRCQLCE 355
            .|.|..|:..|.:......|::.|..|:|..|.:|.:.||...||..|...| ..||.|:|.:|.
  Fly   477 PHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQHRLSHEVLEKNFKCNVCG 541

  Fly   356 DEVAF--SQLAHLKNHMKKIHKQQKPYMCEGCHDFFKIKVELQSHVE--HCAKCPVDGDKP 412
            ....|  |...|.:.|..|.:     |.|:.|.:.|...::|::|::  |.|..|...|:|
  Fly   542 RAYLFEKSLRLHQRTHTGKTY-----YKCDLCQERFVTHIKLKTHMQKAHAASQPHSADQP 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 46/200 (23%)
C2H2 Zn finger 95..115 CDD:275368 4/19 (21%)
C2H2 Zn finger 123..144 CDD:275368 8/20 (40%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
C2H2 Zn finger 180..200 CDD:275368 5/21 (24%)
COG5048 <192..369 CDD:227381 56/241 (23%)
C2H2 Zn finger 210..230 CDD:275370 8/20 (40%)
C2H2 Zn finger 238..260 CDD:275371 8/34 (24%)
C2H2 Zn finger 267..287 CDD:275368 2/19 (11%)
C2H2 Zn finger 295..315 CDD:275368 4/19 (21%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..374 CDD:275368 7/24 (29%)
C2H2 Zn finger 382..399 CDD:275368 4/16 (25%)
CG8301NP_649915.1 zf-AD 3..88 CDD:462262
COG5048 198..>508 CDD:227381 69/314 (22%)
C2H2 Zn finger 221..241 CDD:275368 4/19 (21%)
C2H2 Zn finger 249..269 CDD:275368 8/19 (42%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 305..327 CDD:275368 5/21 (24%)
C2H2 Zn finger 338..359 CDD:275368 0/20 (0%)
C2H2 Zn finger 367..384 CDD:275368 5/16 (31%)
C2H2 Zn finger 400..420 CDD:275368 6/19 (32%)
C2H2 Zn finger 451..471 CDD:275368 5/23 (22%)
C2H2 Zn finger 480..500 CDD:275368 4/19 (21%)
C2H2 Zn finger 508..528 CDD:275368 7/19 (37%)
SUF4-like 536..>586 CDD:411020 13/54 (24%)
C2H2 Zn finger 537..558 CDD:411020 5/20 (25%)
C2H2 Zn finger 537..557 CDD:275368 5/19 (26%)
C2H2 Zn finger 565..586 CDD:411020 5/20 (25%)
C2H2 Zn finger 565..582 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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