DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11247 and Neu2

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster


Alignment Length:326 Identity:94/326 - (28%)
Similarity:149/326 - (45%) Gaps:44/326 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LRDACVDEEEDDG---------GEQDSKD-----DDYVQPQLKKSARKGEPVKRKHHVCSQCSKE 101
            |:|...:|.|:||         .|:|.:|     |...:|.:.:...|.:  ::....||.|.|.
  Fly    65 LKDVREEESENDGSGCSEEVEAAERDLQDGADDVDSGNEPDINECDIKAK--EKPGFSCSHCPKS 127

  Fly   102 FGGKTDLQRHMLIHSDERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKERLR 166
            |..|::|:.||..|:.|||..|..|.||:..:..|:||:.| |...:.|.||.||:||.....|:
  Fly   128 FQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRT-HTGERPFQCSHCPRSFTAGHHLK 191

  Fly   167 LHMRLHSGEKPYPCDLCDKKFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVHMERHE 231
            .|:::|.......|..|.|.|.....|:||:.:|  |...||.|::||.||.....|.:||..|:
  Fly   192 AHIQMHERRGSLRCPYCQKCFLTSLILKQHLATH--TDETQFKCSQCSKSFQVEHELWMHMRVHQ 254

  Fly   232 QGMEHRCSICENQFANELALRAHINQE----------------HHKLTQFECEICHKMIEPDEDL 280
            :.: ..|..|...||....|:.|:::.                |.|  ..:|..|.|.......|
  Fly   255 ERL-FTCGHCSKDFALHAYLKRHLSRNARCSQSSKASAHKTLGHSK--ALKCGKCPKTFTDRSAL 316

  Fly   281 ATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRKHTG 345
            :||::.||..|..:...|.:..::.:..|..      .:|::|..|.:||:..|.|..|::.|||
  Fly   317 STHLKSHTKNKPLLEGPCKSSGSKPAHSNAQ------RKPFKCSSCPRTFSRKSALLTHLQTHTG 375

  Fly   346 E 346
            :
  Fly   376 K 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 55/158 (35%)
C2H2 Zn finger 95..115 CDD:275368 9/19 (47%)
C2H2 Zn finger 123..144 CDD:275368 8/20 (40%)
C2H2 Zn finger 152..172 CDD:275368 8/19 (42%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
COG5048 <192..369 CDD:227381 46/171 (27%)
C2H2 Zn finger 210..230 CDD:275370 8/19 (42%)
C2H2 Zn finger 238..260 CDD:275371 6/37 (16%)
C2H2 Zn finger 267..287 CDD:275368 6/19 (32%)
C2H2 Zn finger 295..315 CDD:275368 2/19 (11%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..374 CDD:275368
C2H2 Zn finger 382..399 CDD:275368
Neu2NP_649316.1 zf-AD 1..63 CDD:462262
COG5048 <119..241 CDD:227381 47/124 (38%)
C2H2 Zn finger 121..141 CDD:275368 9/19 (47%)
zf-H2C2_2 133..156 CDD:463886 10/22 (45%)
C2H2 Zn finger 149..169 CDD:275368 8/20 (40%)
zf-H2C2_2 162..185 CDD:463886 11/23 (48%)
C2H2 Zn finger 177..197 CDD:275368 8/19 (42%)
C2H2 Zn finger 205..225 CDD:275368 7/19 (37%)
zf-C2H2_8 206..286 CDD:464935 25/82 (30%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
C2H2 Zn finger 260..297 CDD:275368 6/36 (17%)
C2H2 Zn finger 303..323 CDD:275368 6/19 (32%)
C2H2 Zn finger 353..373 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.