DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and Meics

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_524062.1 Gene:Meics / 39539 FlyBaseID:FBgn0025874 Length:583 Species:Drosophila melanogaster


Alignment Length:419 Identity:115/419 - (27%)
Similarity:191/419 - (45%) Gaps:70/419 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SLRDACVD--EEEDDGGEQDSKDDDYVQPQLKKSARKGEP------------VKRKHHVCSQCSK 100
            |:::...|  :||:|....||:.:|..|..:..:..:.||            ...:..:|::|..
  Fly   183 SIQETFEDAFDEENDNNNTDSEREDSDQWTVGSTEDQDEPWIPGGGGRQTVGGNNQSLLCTECGV 247

  Fly   101 EFGGKTDLQRHMLIHSD----ERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFAL 161
            .:..:..|.||:..|.:    ::||.|..||:.:|         |.|                  
  Fly   248 SYSTQKALARHVAKHKEQGDTQKPHLCDFCGRGFR---------TNA------------------ 285

  Fly   162 KERLRLHMRLHSGEKPYPCDLCDKKFARGGQLQQHMVSH-----HKTSIQQFNCTKCSASFSTNA 221
              :|..|.|.|:||:|:.|.||.|.:..|..|:.||.:|     ||       |.:|..:|.|..
  Fly   286 --QLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHK-------CPQCDKTFYTRG 341

  Fly   222 NLRVHMERHEQGMEHRCSICENQFANELALRAHINQEHHKLTQFECEICHKMIEPDEDLATHMQR 286
            |||.|::||.....::|..|...||....|:.| ::.|.:...|:||:|.|....::.|.||::.
  Fly   342 NLRAHIQRHTGERPYKCPDCPQTFAKNSGLKLH-SRLHKEERPFKCELCGKGFVQNQHLITHLRV 405

  Fly   287 HTAVKTHVCEVCNTYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRKHTGEKPFRC 351
            |...:...|..|:..|.:||....|.|.|:|.:|::|..|.|.|:|:..||.|:|.||||||::|
  Fly   406 HNGDRQFKCPDCDKSFFEKSNMMKHQRTHSGIKPFKCEECGQAFSHNHHLKSHLRIHTGEKPYKC 470

  Fly   352 QLCEDEVAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFFKIKVELQSHVEHCAKCPVDGDKPSG-N 415
            ..|....:.:| :.:|:.:..:....:|:.|..|...:..:..|:.| |...|.|   |:|.. :
  Fly   471 DQCGKGFSANQ-SLMKHTLWHVDNNDRPFKCSQCPKAYDTQQSLRGH-EKTHKNP---DEPKTLH 530

  Fly   416 QSEDAQILSVLRFNMAVVLKKISSAQKLR 444
            |.....:    ||.:...|.|..::.|:|
  Fly   531 QCPHCDV----RFALKKTLDKHITSHKIR 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 45/167 (27%)
C2H2 Zn finger 95..115 CDD:275368 5/19 (26%)
C2H2 Zn finger 123..144 CDD:275368 5/20 (25%)
C2H2 Zn finger 152..172 CDD:275368 3/19 (16%)
C2H2 Zn finger 180..200 CDD:275368 8/19 (42%)
COG5048 <192..369 CDD:227381 61/181 (34%)
C2H2 Zn finger 210..230 CDD:275370 8/19 (42%)
C2H2 Zn finger 238..260 CDD:275371 6/21 (29%)
C2H2 Zn finger 267..287 CDD:275368 7/19 (37%)
C2H2 Zn finger 295..315 CDD:275368 7/19 (37%)
C2H2 Zn finger 323..343 CDD:275368 9/19 (47%)
C2H2 Zn finger 351..374 CDD:275368 4/22 (18%)
C2H2 Zn finger 382..399 CDD:275368 3/16 (19%)
MeicsNP_524062.1 zf-AD 20..95 CDD:462262
C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 274..294 CDD:275368 9/48 (19%)
SFP1 <296..374 CDD:227516 29/84 (35%)
COG5048 <299..486 CDD:227381 66/195 (34%)
C2H2 Zn finger 302..322 CDD:275368 8/19 (42%)
C2H2 Zn finger 330..350 CDD:275368 8/19 (42%)
C2H2 Zn finger 358..378 CDD:275368 6/20 (30%)
C2H2 Zn finger 386..406 CDD:275368 7/19 (37%)
COG5048 <395..583 CDD:227381 50/170 (29%)
C2H2 Zn finger 414..434 CDD:275368 7/19 (37%)
C2H2 Zn finger 442..462 CDD:275368 9/19 (47%)
C2H2 Zn finger 470..486 CDD:275368 3/16 (19%)
C2H2 Zn finger 500..520 CDD:275368 5/20 (25%)
C2H2 Zn finger 532..552 CDD:275370 4/23 (17%)
C2H2 Zn finger 559..579 CDD:275370
Blue background indicates that the domain is not in the aligned region.

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