DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and CG12605

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_647845.2 Gene:CG12605 / 38468 FlyBaseID:FBgn0035481 Length:619 Species:Drosophila melanogaster


Alignment Length:284 Identity:73/284 - (25%)
Similarity:118/284 - (41%) Gaps:45/284 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VSLLTDSGISLSSPPAARESSPGPTLAIK--------RRKSSLASL------------RDACVDE 58
            :|..::||:.....|..:::....: |:|        |.|:|.|:.            |......
  Fly   337 MSSSSESGLQQWGKPNPQQNQQRAS-ALKMCLNMLDGRTKASKAAAVTKQDRQEPMQPRPKSAQS 400

  Fly    59 EEDDGGEQDSKDDDYVQPQL-KKSARKGEP-VKRKH--HVCSQCSKEFGGKTDLQRHMLIH---S 116
            ....||...|:..:.....| ..|:..||. .|||.  :.|.:|.|::...::|.||...|   .
  Fly   401 NASSGGGPPSEPPENPAASLGHSSSGNGENYAKRKRGCYKCCECGKQYATSSNLSRHKQTHRSLD 465

  Fly   117 DERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHSGEKPYPCD 181
            .:...||..|||:|.....|..|:.|   |:....|..|.|.|:....|:.|:|.|:|||||.|.
  Fly   466 SQSAKKCNTCGKAYVSMPALAMHLLT---HKLSHSCDICGKLFSRPWLLQGHLRSHTGEKPYACV 527

  Fly   182 LCDKKFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVHMER----------HEQGMEH 236
            .|.|.||....|:.||.:|  :..:.|.|.:|:.:|:..:.|..|:|.          ..:|:|.
  Fly   528 HCGKAFADRSNLRAHMQTH--SGDKNFKCHRCNKTFALKSYLNKHLESACLRDAGAIDQGKGLEE 590

  Fly   237 RCSICENQFANELALRAHINQEHH 260
            ....|..|  :||.:...:..:.:
  Fly   591 EDDDCSKQ--DELEMGDELESDEN 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 53/173 (31%)
C2H2 Zn finger 95..115 CDD:275368 6/19 (32%)
C2H2 Zn finger 123..144 CDD:275368 8/20 (40%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
C2H2 Zn finger 180..200 CDD:275368 8/19 (42%)
COG5048 <192..369 CDD:227381 17/79 (22%)
C2H2 Zn finger 210..230 CDD:275370 6/29 (21%)
C2H2 Zn finger 238..260 CDD:275371 4/21 (19%)
C2H2 Zn finger 267..287 CDD:275368
C2H2 Zn finger 295..315 CDD:275368
C2H2 Zn finger 323..343 CDD:275368
C2H2 Zn finger 351..374 CDD:275368
C2H2 Zn finger 382..399 CDD:275368
CG12605NP_647845.2 COG5048 283..>561 CDD:227381 63/229 (28%)
zf-C2H2 439..461 CDD:395048 6/21 (29%)
C2H2 Zn finger 441..461 CDD:275370 6/19 (32%)
C2H2 Zn finger 472..492 CDD:275368 8/22 (36%)
zf-C2H2 496..518 CDD:395048 7/21 (33%)
C2H2 Zn finger 498..518 CDD:275368 7/19 (37%)
zf-H2C2_2 511..534 CDD:463886 12/22 (55%)
zf-C2H2 524..546 CDD:395048 9/21 (43%)
C2H2 Zn finger 526..546 CDD:275368 8/19 (42%)
zf-H2C2_2 538..562 CDD:463886 7/25 (28%)
C2H2 Zn finger 554..571 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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