DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and CG4282

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster


Alignment Length:516 Identity:123/516 - (23%)
Similarity:190/516 - (36%) Gaps:130/516 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RSRRSVSKEDAVSLLTD---SGISLSSPPAARESSPGPTLAIKRRKSSLA-------------SL 51
            |.|:.:..||..|:..|   .|:..::.||..:...|     :.|||..|             .|
  Fly   164 RLRKRLKAEDGSSVDKDKDEDGVEETAEPAPPKKRRG-----RPRKSDAAVAPPQKPKEDIQLDL 223

  Fly    52 R----DACVDEE---------------EDDGGEQ--DSKDDDY-----------------VQP-Q 77
            :    |..||||               |||||..  || |.|:                 |:| :
  Fly   224 KAEELDEFVDEETDPDFSCLVPSDNSSEDDGGSDGFDS-DSDFELDNGKQEFAVLPKRTVVRPKK 287

  Fly    78 LKKSARKGEPVKR--------------KHHV-----------CSQCSKEFGGKTDLQRHMLIHSD 117
            .||..:..||..|              ::.|           |:.|:......|::|||..:...
  Fly   288 YKKRTKPAEPKVRMSRELLEQRKKQQEEYDVIIAKFFTSVLPCAICNLLVHNFTEMQRHHRLTHQ 352

  Fly   118 ERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLH---SGEKPYP 179
            ..|.....||:.:.|...|..|: ..|.:...|.||.|.|||.....|..|.::|   :.:..:.
  Fly   353 VDPGYMMCCGRKFTQRKVLAEHV-LVHWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPAVKLTFS 416

  Fly   180 CDLCDKKFARGGQLQQHMVSHHKTSIQ-QFNCTKCSASFSTNANLRVHM-ERHEQGMEHRCSICE 242
            ||||.|.|.....:..|.::.|....: :|.|::|:..|.|...|:.|| ..|:......|..|.
  Fly   417 CDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIICDKCG 481

  Fly   243 NQFANELALRAHINQEHHKLTQFE-----CEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYF 302
            .|...::.|:.|....|....:.|     |:||...::....|..||:                 
  Fly   482 KQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHMK----------------- 529

  Fly   303 TQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHI-RKHTGEKPFRCQLCEDEVAFSQLAHL 366
                  ::|:. ..||  ::|.||.:...::..|:.|| ..|..|:.|:|.:||.  ||.:...|
  Fly   530 ------SIHVE-SAGE--HRCHICAKVSPNARALRRHIYHNHECERKFKCTMCEK--AFKRPQEL 583

  Fly   367 KNHMKKIHKQQKPYMCEGCHDFFKIKVELQSHVEHCAKCPVDGDKPSGNQSEDAQILSVLR 427
            |.| ...|..:..|.|..|...|.....:..|.:...:...:.||   ||.:...||.:.|
  Fly   584 KEH-TSTHTGEVLYTCPNCPMTFFCSANMYKHRQRLHRAQYEADK---NQPKPPNILKISR 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 45/188 (24%)
C2H2 Zn finger 95..115 CDD:275368 6/19 (32%)
C2H2 Zn finger 123..144 CDD:275368 5/20 (25%)
C2H2 Zn finger 152..172 CDD:275368 8/19 (42%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
COG5048 <192..369 CDD:227381 43/184 (23%)
C2H2 Zn finger 210..230 CDD:275370 7/20 (35%)
C2H2 Zn finger 238..260 CDD:275371 5/21 (24%)
C2H2 Zn finger 267..287 CDD:275368 6/19 (32%)
C2H2 Zn finger 295..315 CDD:275368 1/19 (5%)
C2H2 Zn finger 323..343 CDD:275368 6/20 (30%)
C2H2 Zn finger 351..374 CDD:275368 8/22 (36%)
C2H2 Zn finger 382..399 CDD:275368 3/16 (19%)
CG4282NP_611118.3 zf-AD 7..82 CDD:462262
PLN03237 <81..239 CDD:215641 20/79 (25%)
C2H2 Zn finger 330..351 CDD:275368 6/20 (30%)
C2H2 Zn finger 360..378 CDD:275368 5/18 (28%)
LIM 361..>400 CDD:413332 13/39 (33%)
C2H2 Zn finger 386..406 CDD:275368 8/19 (42%)
C2H2 Zn finger 417..438 CDD:275368 7/20 (35%)
C2H2 Zn finger 448..465 CDD:275368 5/16 (31%)
C2H2 Zn finger 477..498 CDD:275368 5/20 (25%)
C2H2 Zn finger 511..532 CDD:275368 6/43 (14%)
C2H2 Zn finger 541..562 CDD:275368 6/20 (30%)
C2H2 Zn finger 570..590 CDD:275368 8/22 (36%)
C2H2 Zn finger 598..619 CDD:275368 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.

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