DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and cg

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_001097306.2 Gene:cg / 36571 FlyBaseID:FBgn0000289 Length:837 Species:Drosophila melanogaster


Alignment Length:419 Identity:109/419 - (26%)
Similarity:164/419 - (39%) Gaps:118/419 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SVSKEDAVSLLTDSGIS------LSSPPAARESSPGPTLAIKRRKSSLASLRDACVDEEEDDGGE 65
            ||..:..:..|.|:..|      |...|...|.||...|    ::|...|..||.:.:|.....:
  Fly   235 SVQVQKVIQGLEDNEDSQGEAPNLKLEPGTLELSPKTEL----QESMHFSETDATIKKERPYSCD 295

  Fly    66 QDSKDDDYVQPQLKKSAR--KGEPVKRKHHVCSQCSKEFGGKTDLQRHMLIHSDERPHKCKDCGK 128
            :..| ...::..|...||  .||    :.|:|:.|.|.|..|..|..|:|:||.|||::|::|.|
  Fly   296 ECGK-SFLLKHHLTTHARVHTGE----RPHICTHCGKSFAHKHCLNTHLLLHSTERPYQCQECKK 355

  Fly   129 SYRQAVNLKNHITT---AHEHRKQFVCSQCPKSFALKERLRLHMRLHSGEKPYPCDLCDKKFARG 190
            |:    .||:|:.|   .|...:.|||.:|.::|.||..|..|.:.|:||:||.|:.|.:.||: 
  Fly   356 SF----TLKHHLLTHSRVHSRERPFVCQECGRAFPLKRHLVTHSKFHAGERPYVCEECGESFAQ- 415

  Fly   191 GQLQQHMVSHHK--TSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRCSICENQFANELALRA 253
               :.|::.|.:  .|:..|.|.:|.|||.....|..|...|.: :.|.|::|..:|..:     
  Fly   416 ---ENHLIMHSRFHGSLNPFVCAECGASFPRKFQLVNHGRIHGK-IPHSCTVCGKEFLQK----- 471

  Fly   254 HINQEHHKLTQFECEICHKMIEPDEDLATHMQR-HTAVKTHVCEVCNTYFTQKSQYNVHMR-MHT 316
                                    ..|.:||:| ||..:.|.|..|...|..|::.:.|:| .|.
  Fly   472 ------------------------RTLVSHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRTAHN 512

  Fly   317 GERP--------------------------------------------------------YQCRI 325
            |..|                                                        :.||.
  Fly   513 GVNPNTSSATIIANQQLQQAHHHQAGQQTHPQTITVVSNPGNSTLLTVSTTDANGVARPQFVCRE 577

  Fly   326 CHQTFAHSSVLKLHIRKHTGEKPFRCQLC 354
            |...|.....|.||:|.|||:|.....||
  Fly   578 CGSAFNSREALALHLRLHTGDKSLMTDLC 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 57/163 (35%)
C2H2 Zn finger 95..115 CDD:275368 8/19 (42%)
C2H2 Zn finger 123..144 CDD:275368 8/23 (35%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
C2H2 Zn finger 180..200 CDD:275368 5/19 (26%)
COG5048 <192..369 CDD:227381 46/223 (21%)
C2H2 Zn finger 210..230 CDD:275370 7/19 (37%)
C2H2 Zn finger 238..260 CDD:275371 3/21 (14%)
C2H2 Zn finger 267..287 CDD:275368 4/20 (20%)
C2H2 Zn finger 295..315 CDD:275368 6/20 (30%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..374 CDD:275368 2/4 (50%)
C2H2 Zn finger 382..399 CDD:275368
cgNP_001097306.2 COG5048 287..>371 CDD:227381 29/92 (32%)
C2H2 Zn finger 294..314 CDD:275368 4/20 (20%)
zf-H2C2_2 306..331 CDD:463886 10/28 (36%)
C2H2 Zn finger 322..342 CDD:275368 8/19 (42%)
C2H2 Zn finger 350..370 CDD:275368 8/23 (35%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 6/23 (26%)
C2H2 Zn finger 434..454 CDD:275368 7/19 (37%)
C2H2 Zn finger 461..482 CDD:275368 7/49 (14%)
C2H2 Zn finger 490..509 CDD:275368 5/18 (28%)
C2H2 Zn finger 575..595 CDD:275368 8/19 (42%)
C2H2 Zn finger 720..740 CDD:275368
C2H2 Zn finger 752..771 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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