DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and crol

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster


Alignment Length:432 Identity:125/432 - (28%)
Similarity:182/432 - (42%) Gaps:73/432 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 KKSARKGEPVK--RKH-----HVCSQCSKEFGGKTDLQRHMLIHSDERPHKCKDCGKSYRQAVNL 136
            |...||...|.  |||     |.|..|.|.|..|.....|.:.|:.:.||:|..|||.|.:..:|
  Fly   340 KTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHL 404

  Fly   137 KNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHSGEKPYPCDLCDKKFARGGQLQQHMVSHH 201
            .||: .:|.:...|.|..|.|||:.||....|:..|:||.|:.||.|.|.|.|...|..|:..| 
  Fly   405 ANHM-RSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQH- 467

  Fly   202 KTSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRCSICENQFANELALRAHINQEHHKLTQFE 266
             |......|:.|..:|:...:|..|:.:|......:|:.|...|..:..:..|:.| |...:..:
  Fly   468 -TGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQ-HTGESPHK 530

  Fly   267 CEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHMRMHTGERPYQCRICHQTFA 331
            |..|.|.....|.|..|:::||....|.|..|...||:|.....|:|:|||:.|::|..|.:||.
  Fly   531 CTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFT 595

  Fly   332 HSSVLKLHIRKHTGEKPFRCQLCEDEVAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFFKIKVEL- 395
            ....|..|:|:|:.:.|..|.:|..  .|::..||.|||.:.|...:|:.||.|...|.:|..| 
  Fly   596 RKEHLNNHMRQHSSDNPHCCNVCNK--PFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLL 658

  Fly   396 ---QSHVE--------HCAKCPVD---------------GDKPSGNQSEDAQILSVLRFNMAVVL 434
               :||.:        .|.|||.:               |:||                      
  Fly   659 FHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKP---------------------- 701

  Fly   435 KKISSAQKLRQLGYEKRLIDNVIIASLKLAQRQSHDDATMTP 476
                .|..|....:.:|       .:||...:.:|.||.|.|
  Fly   702 ----HACTLCSKAFVER-------GNLKRHMKMNHPDAMMPP 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 55/165 (33%)
C2H2 Zn finger 95..115 CDD:275368 6/19 (32%)
C2H2 Zn finger 123..144 CDD:275368 8/20 (40%)
C2H2 Zn finger 152..172 CDD:275368 8/19 (42%)
C2H2 Zn finger 180..200 CDD:275368 8/19 (42%)
COG5048 <192..369 CDD:227381 50/176 (28%)
C2H2 Zn finger 210..230 CDD:275370 5/19 (26%)
C2H2 Zn finger 238..260 CDD:275371 5/21 (24%)
C2H2 Zn finger 267..287 CDD:275368 6/19 (32%)
C2H2 Zn finger 295..315 CDD:275368 7/19 (37%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..374 CDD:275368 8/22 (36%)
C2H2 Zn finger 382..399 CDD:275368 7/20 (35%)
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368
COG5048 300..723 CDD:227381 120/421 (29%)
C2H2 Zn finger 307..327 CDD:275368
C2H2 Zn finger 335..355 CDD:275368 5/14 (36%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
C2H2 Zn finger 391..411 CDD:275368 8/20 (40%)
C2H2 Zn finger 419..439 CDD:275368 8/19 (42%)
C2H2 Zn finger 447..467 CDD:275368 8/19 (42%)
C2H2 Zn finger 475..495 CDD:275368 5/19 (26%)
C2H2 Zn finger 503..523 CDD:275368 5/20 (25%)
C2H2 Zn finger 531..551 CDD:275368 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 7/19 (37%)
C2H2 Zn finger 615..636 CDD:275368 8/22 (36%)
C2H2 Zn finger 644..664 CDD:275368 6/19 (32%)
C2H2 Zn finger 676..696 CDD:275368 4/19 (21%)
C2H2 Zn finger 704..722 CDD:275368 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.

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