DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and CG17612

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster


Alignment Length:474 Identity:106/474 - (22%)
Similarity:184/474 - (38%) Gaps:129/474 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RRKSSLASLRDACVDEE--EDDGGE------QDSKDDDYVQPQLKKSARKGEPVKRKHHVCSQCS 99
            |..:.:..::|:..:|.  ||....      |||..::.: |.:|:.|.:||.::.::.:.::|.
  Fly   116 RANNDVILIQDSFAEEVILEDHPANNDVIIIQDSVAEEEL-PVIKEEAIEGEDLQGEYFIITECL 179

  Fly   100 KE--FGGKTDLQRHMLIHSD------ERPHK------------------------------CKDC 126
            :|  .|.    .|..|..||      :..|:                              |.|.
  Fly   180 EEPAIGS----CRVCLEQSDNLTNIFDDAHQYGIPIATILSQYTGMPVEKGDSFSEYICVTCLDV 240

  Fly   127 GKS--------------YRQ---------AVNLKN-----HITTAHEHRKQFVCSQCPKSFALKE 163
            .|:              |||         ::.:||     .:|....||    |.||||.|.|..
  Fly   241 VKNAFDDLESKENTIQMYRQPKEEIIDIDSIPVKNKPVDYEVTGKPPHR----CPQCPKIFLLAA 301

  Fly   164 RLRLHMRLH----SGEKP-YPCDLCDKKFARGGQLQQHMVSHHKTSIQQ------FNCTKCSASF 217
            :|:.|:|.|    :.|.| ..|.:|...:.:.|.|:.||..|..:..::      :.|..|...|
  Fly   302 KLQAHIRTHNETRTTEPPRLKCPMCPSIYMKRGCLEAHMWIHRASDERESELEPPYRCPHCPKLF 366

  Fly   218 STNANLRVHMERHE-------QGMEHRCSICENQFANELALRAHINQEHHKLTQFECEICHKMIE 275
            ..::.|.:|::.||       :...|:|:.|.:.|::..:|:.|: :.|.....|:|.:|....:
  Fly   367 LYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCADVFSDVSSLKDHV-KIHAGERTFKCPLCLMSFQ 430

  Fly   276 PDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHM-RMHTGERPYQCRICHQTFAHSSVLKLH 339
            .:.:|.:|...||..|   |..|:.:|..::..:.|. :.||.:.|::|..|.|||...:.||.|
  Fly   431 EESNLKSHDCAHTRFK---CHKCSKFFESQNYLDFHFKKSHTTKGPFKCIKCQQTFQKRNGLKEH 492

  Fly   340 I---------RKHTGEKPFRCQLC------EDEVAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFF 389
            |         |..:..:.|.|..|      ||........|     ||:....:.:.|..|...:
  Fly   493 ISSQVCVQFLRSKSPGQIFPCPKCPKKFSIEDNYQMHHATH-----KKVKTVIERHNCTQCKKSY 552

  Fly   390 KIKVELQSHV---EHCAKC 405
            :.|..|..|:   ..|..|
  Fly   553 QNKKLLTKHILSHNRCVHC 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 50/242 (21%)
C2H2 Zn finger 95..115 CDD:275368 5/21 (24%)
C2H2 Zn finger 123..144 CDD:275368 9/48 (19%)
C2H2 Zn finger 152..172 CDD:275368 10/19 (53%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
COG5048 <192..369 CDD:227381 49/205 (24%)
C2H2 Zn finger 210..230 CDD:275370 5/19 (26%)
C2H2 Zn finger 238..260 CDD:275371 5/21 (24%)
C2H2 Zn finger 267..287 CDD:275368 4/19 (21%)
C2H2 Zn finger 295..315 CDD:275368 4/20 (20%)
C2H2 Zn finger 323..343 CDD:275368 10/28 (36%)
C2H2 Zn finger 351..374 CDD:275368 7/28 (25%)
C2H2 Zn finger 382..399 CDD:275368 4/16 (25%)
CG17612NP_608824.1 zf-AD 187..>246 CDD:462262 8/58 (14%)
C2H2 Zn finger 290..310 CDD:275368 10/19 (53%)
C2H2 Zn finger 323..343 CDD:275370 6/19 (32%)
C2H2 Zn finger 359..379 CDD:275368 5/19 (26%)
C2H2 Zn finger 394..414 CDD:275368 5/20 (25%)
C2H2 Zn finger 422..438 CDD:275368 3/15 (20%)
C2H2 Zn finger 447..463 CDD:275368 3/15 (20%)
C2H2 Zn finger 476..505 CDD:275368 10/28 (36%)
C2H2 Zn finger 513..533 CDD:275368 4/19 (21%)
C2H2 Zn finger 545..565 CDD:275368 5/19 (26%)
C2H2 Zn finger 568..584 CDD:275368 2/4 (50%)

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