DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and erm

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_001259891.2 Gene:erm / 326152 FlyBaseID:FBgn0031375 Length:698 Species:Drosophila melanogaster


Alignment Length:338 Identity:83/338 - (24%)
Similarity:113/338 - (33%) Gaps:124/338 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RRSVSKEDAVSLLTDSGISLSSPPAARESSPGPTLAIKRRKSSLASLRDACVDEEEDDGGEQDSK 69
            :|..|.:|...:......:.:|...||..||.|                        .|..:||.
  Fly   266 KRKRSPQDQGEVTPPPASTATSATGARSRSPSP------------------------QGSIEDSS 306

  Fly    70 DDDYVQPQLKKSARKGEPVKRKHHVCSQCSKEFGGKTDLQRHMLIHSDERPHKCKDCGKSYRQAV 134
            ..         ||..|:|   |...|.:|.|.|....:|.|||.:|:..||..||.|||.:|||.
  Fly   307 PG---------SASGGKP---KTFSCLECGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQAS 359

  Fly   135 NLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHSGEKPYPCDLCDKKFARGGQLQQHMVS 199
            .|..| ...|...|...|..|.|:|.....|..|.|:|:|.||:.|:.|.|.|            
  Fly   360 TLCRH-KIIHTSEKPHKCQTCGKAFNRSSTLNTHSRIHAGYKPFVCEYCGKGF------------ 411

  Fly   200 HHKTSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRCSICENQFANELALRAHINQEHHKLTQ 264
                                          |::|                      |.::|||| 
  Fly   412 ------------------------------HQKG----------------------NYKNHKLT- 423

  Fly   265 FECEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHMRMHTGERPYQCRICHQT 329
                                  |:..|.:.|.:||..|.|......||..|..::||.||:|.:.
  Fly   424 ----------------------HSGEKAYKCNICNKAFHQVYNLTFHMHTHNDKKPYTCRVCAKG 466

  Fly   330 FAHSSVLKLHIRK 342
            |..:..||.|:||
  Fly   467 FCRNFDLKKHMRK 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 41/158 (26%)
C2H2 Zn finger 95..115 CDD:275368 8/19 (42%)
C2H2 Zn finger 123..144 CDD:275368 10/20 (50%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
C2H2 Zn finger 180..200 CDD:275368 4/19 (21%)
COG5048 <192..369 CDD:227381 28/151 (19%)
C2H2 Zn finger 210..230 CDD:275370 0/19 (0%)
C2H2 Zn finger 238..260 CDD:275371 1/21 (5%)
C2H2 Zn finger 267..287 CDD:275368 0/19 (0%)
C2H2 Zn finger 295..315 CDD:275368 7/19 (37%)
C2H2 Zn finger 323..343 CDD:275368 9/20 (45%)
C2H2 Zn finger 351..374 CDD:275368
C2H2 Zn finger 382..399 CDD:275368
ermNP_001259891.2 COG5048 <295..461 CDD:227381 68/289 (24%)
C2H2 Zn finger 320..340 CDD:275368 8/19 (42%)
C2H2 Zn finger 348..368 CDD:275368 10/20 (50%)
zf-H2C2_2 363..385 CDD:463886 7/22 (32%)
C2H2 Zn finger 376..396 CDD:275368 7/19 (37%)
C2H2 Zn finger 404..424 CDD:275368 11/106 (10%)
C2H2 Zn finger 432..452 CDD:275368 7/19 (37%)
C2H2 Zn finger 460..478 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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