DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and CG18262

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster


Alignment Length:314 Identity:90/314 - (28%)
Similarity:133/314 - (42%) Gaps:37/314 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 KSSLASLRDACVDEEED-DGGEQ------------DSKDDDYVQPQLKKSARKGEPVKRKHHVCS 96
            |::|...|:..:|.|.| .||||            :|.|||         .:.....|.....|.
  Fly   120 KNTLVETREDLLDIELDWTGGEQSEHNETHEEEEGESDDDD---------TKDSNDTKDMLFQCD 175

  Fly    97 QCSKEFGGKTDLQRHMLIHSDERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQ--CPKSF 159
            ||.:.:..|..||.|..:...|......|...|.|.:...|.       ..|.:.|::  |.::|
  Fly   176 QCDRAYNTKRSLQSHRRLKHSEANGGSLDKSASERNSKKRKG-------PPKVYKCNEEACNQTF 233

  Fly   160 ALKERLRLHMRLHSGEKPYPCDLCDKKFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLR 224
            ..:..||.|...|:|   ..||:|.|.|.:.|.:.:|...|  :.|:...|.:|.|:|.|...|.
  Fly   234 RTERDLRGHRWKHTG---IFCDICGKPFTQSGNMMRHRQRH--SGIKPHKCPECDATFYTQKELS 293

  Fly   225 VHMERHEQGMEHRCSICENQFANELALRAHINQEHHKLTQFECEICHKMIEPDEDLATHMQRHTA 289
            .|...|...|...|.:|.....:...|.||: :.|......:||:|.|......||..|...||.
  Fly   294 SHSICHTGRMPCICEVCGRPCRDRGVLTAHM-RRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTN 357

  Fly   290 VKTHVCEVCNTYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRKH 343
            ::..||:||.:.|.:|....||..:|:.:|.|.|::|.:|||.|..|..|:|.|
  Fly   358 LRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYACKLCGKTFAQSGGLNAHMRSH 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 42/160 (26%)
C2H2 Zn finger 95..115 CDD:275368 7/19 (37%)
C2H2 Zn finger 123..144 CDD:275368 4/20 (20%)
C2H2 Zn finger 152..172 CDD:275368 6/21 (29%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
COG5048 <192..369 CDD:227381 48/152 (32%)
C2H2 Zn finger 210..230 CDD:275370 7/19 (37%)
C2H2 Zn finger 238..260 CDD:275371 5/21 (24%)
C2H2 Zn finger 267..287 CDD:275368 7/19 (37%)
C2H2 Zn finger 295..315 CDD:275368 7/19 (37%)
C2H2 Zn finger 323..343 CDD:275368 9/19 (47%)
C2H2 Zn finger 351..374 CDD:275368
C2H2 Zn finger 382..399 CDD:275368
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 28/95 (29%)
C2H2 Zn finger 224..246 CDD:275368 6/21 (29%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
zf-H2C2_2 263..288 CDD:463886 7/26 (27%)
C2H2 Zn finger 279..327 CDD:275368 14/48 (29%)
zf-H2C2_2 320..342 CDD:463886 8/22 (36%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
zf-C2H2 389..411 CDD:395048 10/21 (48%)
C2H2 Zn finger 391..411 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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