DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11247 and CG11398

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_569896.1 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster


Alignment Length:234 Identity:53/234 - (22%)
Similarity:94/234 - (40%) Gaps:16/234 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 PHKCKDCGKSYRQAVNLKNHITTAHEHRK----QFVCSQCPKSFALKERLRLHMRLH---SGEK- 176
            ||..:|...|..........:....:|::    .|||.:||..|..:|.|..|...|   .|:: 
  Fly    16 PHTYEDEELSLNTEELQFEELNERSQHQQGGSPSFVCRRCPALFLTREELAAHRPTHRYQGGQQT 80

  Fly   177 ---PYPCDLCDKKFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVHMER-HEQGMEHR 237
               .:.||.|.:.|.:...|..||.:|:  .::.:.|.:|.|.|...:|...|::. |.:...|.
  Fly    81 PASEHACDACGRVFQKHNALVDHMNAHN--DVRNYPCPECPARFVQRSNRECHLKNVHRKVYLHS 143

  Fly   238 CSI--CENQFANELALRAHINQEHHKLTQFECEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNT 300
            |..  |:.:|........|:...|.......|:.|........:...|:..|.:.|::.|.:|..
  Fly   144 CPEPGCKKRFQQRRECDQHVKTVHQNERNLVCDTCSARFSHPVNYRKHLASHGSAKSYGCPICGK 208

  Fly   301 YFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLH 339
            .|.:....:||:.:|:..:.|.|.:|...:...:.|..|
  Fly   209 LFGRPENRDVHLFVHSICKAYICSVCGADYMRRNQLIRH 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 35/140 (25%)
C2H2 Zn finger 95..115 CDD:275368
C2H2 Zn finger 123..144 CDD:275368 2/20 (10%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
COG5048 <192..369 CDD:227381 33/151 (22%)
C2H2 Zn finger 210..230 CDD:275370 6/20 (30%)
C2H2 Zn finger 238..260 CDD:275371 4/23 (17%)
C2H2 Zn finger 267..287 CDD:275368 3/19 (16%)
C2H2 Zn finger 295..315 CDD:275368 5/19 (26%)
C2H2 Zn finger 323..343 CDD:275368 4/17 (24%)
C2H2 Zn finger 351..374 CDD:275368
C2H2 Zn finger 382..399 CDD:275368
CG11398NP_569896.1 C2H2 Zn finger 52..72 CDD:275368 7/19 (37%)
C2H2 Zn finger 87..107 CDD:275368 7/19 (37%)
C2H2 Zn finger 115..136 CDD:275368 6/20 (30%)
C2H2 Zn finger 144..165 CDD:275368 4/20 (20%)
C2H2 Zn finger 175..195 CDD:275368 3/19 (16%)
C2H2 Zn finger 203..223 CDD:275368 5/19 (26%)
C2H2 Zn finger 231..247 CDD:275368 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.