DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11247 and ztf-28

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_503566.1 Gene:ztf-28 / 185364 WormBaseID:WBGene00018099 Length:272 Species:Caenorhabditis elegans


Alignment Length:235 Identity:56/235 - (23%)
Similarity:93/235 - (39%) Gaps:53/235 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 TYFTQKSQYNVHMRMHTGE--RP-----YQCRICHQTFAHSSVLKLHIRKHTGEKPFRCQLCEDE 357
            |.|.:||..   :|....|  ||     :.|..|.|.|.|.:.|..| ||......:.|.||..:
 Worm    15 TEFAEKSSL---LRKEESELKRPDLRGDFLCLSCGQNFKHGASLNRH-RKLVHSDEYTCMLCARK 75

  Fly   358 VAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFFKIKVELQSHVEHCAKCPVDGD----KPSGNQSE 418
            :...:.  :::||:..|...:.|.|..|:..|..|..|..|.:...:....||    ..|||...
 Worm    76 LYLKET--VRDHMRNEHYLGQVYTCGCCNWTFSNKKALTEHAKAIQETGAPGDANPIAKSGNSPG 138

  Fly   419 DAQILSVLRFNMAVVLKKISSAQKLRQLGYE-KRLIDNVIIASLKLAQRQSHD-DATMTPLARLR 481
                 |:|:             ..:::.|:: .||::..:..|...:...|.. ||:.:|...|.
 Worm   139 -----SLLK-------------SPIQRAGFKLNRLLNKSLSPSTSNSTTSSSSRDASGSPQPELE 185

  Fly   482 LNVEEFLKWIVPAPTMQKFSDELL--------SIDTILEK 513
            |.:|       |.|..:. ::|.|        ::||||::
 Worm   186 LKLE-------PEPEPEP-NEEALEYKRFFNNAVDTILQR 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381
C2H2 Zn finger 95..115 CDD:275368
C2H2 Zn finger 123..144 CDD:275368
C2H2 Zn finger 152..172 CDD:275368
C2H2 Zn finger 180..200 CDD:275368
COG5048 <192..369 CDD:227381 20/75 (27%)
C2H2 Zn finger 210..230 CDD:275370
C2H2 Zn finger 238..260 CDD:275371
C2H2 Zn finger 267..287 CDD:275368
C2H2 Zn finger 295..315 CDD:275368 5/14 (36%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..374 CDD:275368 5/22 (23%)
C2H2 Zn finger 382..399 CDD:275368 5/16 (31%)
ztf-28NP_503566.1 COG5236 <14..>114 CDD:227561 29/104 (28%)
C2H2 Zn finger 42..63 CDD:275368 9/21 (43%)
C2H2 Zn finger 69..90 CDD:275368 5/22 (23%)
C2H2 Zn finger 98..114 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.