DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and lsy-27

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_001256739.1 Gene:lsy-27 / 180149 WormBaseID:WBGene00009834 Length:250 Species:Caenorhabditis elegans


Alignment Length:97 Identity:31/97 - (31%)
Similarity:44/97 - (45%) Gaps:3/97 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 KKSARKGEPVKRKHHVCSQCSKEFGGKTDLQRH-MLIHSDERPHKCKDCGKSYRQAVNLKNHITT 142
            |:......|..|...|||.||:.|.....|.|| .|:||:|  |.|..|.::..|...::.|:..
 Worm    11 KEDTELKRPDLRGKFVCSSCSQNFQHSASLNRHRQLMHSNE--HTCMMCERALNQKETIREHMRN 73

  Fly   143 AHEHRKQFVCSQCPKSFALKERLRLHMRLHSG 174
            .|...:.|.|..|..:||.|.:|..|.:...|
 Worm    74 EHNLAQVFTCGCCNWTFASKRQLTEHTKCIQG 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 29/88 (33%)
C2H2 Zn finger 95..115 CDD:275368 9/20 (45%)
C2H2 Zn finger 123..144 CDD:275368 4/20 (20%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
C2H2 Zn finger 180..200 CDD:275368
COG5048 <192..369 CDD:227381
C2H2 Zn finger 210..230 CDD:275370
C2H2 Zn finger 238..260 CDD:275371
C2H2 Zn finger 267..287 CDD:275368
C2H2 Zn finger 295..315 CDD:275368
C2H2 Zn finger 323..343 CDD:275368
C2H2 Zn finger 351..374 CDD:275368
C2H2 Zn finger 382..399 CDD:275368
lsy-27NP_001256739.1 COG5236 <22..>122 CDD:227561 29/86 (34%)
C2H2 Zn finger 27..48 CDD:275368 9/20 (45%)
C2H2 Zn finger 54..75 CDD:275368 4/20 (20%)
C2H2 Zn finger 83..102 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.

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