DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and LOC116406487

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_031760245.1 Gene:LOC116406487 / 116406487 XenbaseID:XB-GENE-29091511 Length:380 Species:Xenopus tropicalis


Alignment Length:367 Identity:109/367 - (29%)
Similarity:164/367 - (44%) Gaps:52/367 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GISLSSPPAARESSP-GPTLAIKR-----RKSSLASLRDACVDEEEDDGGEQDSKDDDYVQPQLK 79
            |:|.::.|:....:. |.|.::.:     |:||.......|.:..:......::.:.:....|.|
 Frog    35 GLSNTAEPSPLNGTECGETSSLTKDCQGQRRSSTEEKLFVCAECGKTSPQNANTGERNITCAQCK 99

  Fly    80 KSARKGEPVKRKHH----------VCSQCSKEFGGKTDLQRHMLIHSDERPHKCKDCGKSYRQAV 134
            ::  :...:.|..|          .|::..|.|..|..|..||.||:.|:|..|.:|||.:.|..
 Frog   100 ET--QSFRISRLTHFVIHTGEETITCTESGKGFAQKNYLVSHMKIHTGEKPFTCTECGKGFAQKN 162

  Fly   135 NLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHSGEKPYPCDLCDKKFARGGQLQQHMVS 199
            .|.:|: ..|...|.|.|::|.|.||.|..|..|:::|:||||:.|..|.|.||:...|..||..
 Frog   163 YLVSHM-KIHTGEKPFTCTECGKCFAHKNNLVCHLKIHTGEKPFTCSECGKGFAQKNDLVSHMKI 226

  Fly   200 HHKTSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRCSICENQFANELALRAHINQEHHKLTQ 264
            |  |..:.|.||:|...|....:|..||:.|.......|:.|...|          .|::|    
 Frog   227 H--TGEKPFTCTECGKGFIQKNHLVAHMKIHTGEKPFTCTECGKGF----------TQKNH---- 275

  Fly   265 FECEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHMRMHTGERPYQCRICHQT 329
                           |..||:.||..|...|..|...||||:....||::||||:|:.|..|.:.
 Frog   276 ---------------LVAHMKIHTGEKPFTCTECGKGFTQKNHLVAHMKIHTGEKPFTCTECGKG 325

  Fly   330 FAHSSVLKLHIRKHTGEKPFRCQLCEDEVAFSQLAHLKNHMK 371
            |||.:.|..|::.||||..|.|..|  .::|.:.|.|..|.|
 Frog   326 FAHKNNLIGHLKIHTGENLFTCTEC--GISFPEKAILCIHQK 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 58/168 (35%)
C2H2 Zn finger 95..115 CDD:275368 7/19 (37%)
C2H2 Zn finger 123..144 CDD:275368 7/20 (35%)
C2H2 Zn finger 152..172 CDD:275368 8/19 (42%)
C2H2 Zn finger 180..200 CDD:275368 8/19 (42%)
COG5048 <192..369 CDD:227381 55/176 (31%)
C2H2 Zn finger 210..230 CDD:275370 7/19 (37%)
C2H2 Zn finger 238..260 CDD:275371 4/21 (19%)
C2H2 Zn finger 267..287 CDD:275368 3/19 (16%)
C2H2 Zn finger 295..315 CDD:275368 8/19 (42%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..374 CDD:275368 7/21 (33%)
C2H2 Zn finger 382..399 CDD:275368
LOC116406487XP_031760245.1 C2H2 Zn finger 95..115 CDD:275368 4/21 (19%)
C2H2 Zn finger 123..143 CDD:275368 7/19 (37%)
zf-H2C2_2 135..160 CDD:463886 11/24 (46%)
C2H2 Zn finger 151..171 CDD:275368 7/20 (35%)
zf-H2C2_2 163..188 CDD:463886 9/25 (36%)
C2H2 Zn finger 179..199 CDD:275368 8/19 (42%)
COG5048 <203..347 CDD:227381 57/174 (33%)
C2H2 Zn finger 207..227 CDD:275368 8/19 (42%)
C2H2 Zn finger 235..255 CDD:275368 7/19 (37%)
C2H2 Zn finger 263..283 CDD:275368 8/48 (17%)
C2H2 Zn finger 291..311 CDD:275368 8/19 (42%)
C2H2 Zn finger 319..339 CDD:275368 7/19 (37%)
C2H2 Zn finger 347..367 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.

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