DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and Rex2

DIOPT Version :9

Sequence 1:NP_001097659.1 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_001171238.1 Gene:Rex2 / 100043034 MGIID:1328322 Length:685 Species:Mus musculus


Alignment Length:422 Identity:127/422 - (30%)
Similarity:182/422 - (43%) Gaps:78/422 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 GEQDS--KDDDYVQPQL-----KKSARKGEPVK-----------------RKHHVCSQCSKEFGG 104
            ||.|.  ...|.:|.|.     |||.:..|..|                 .|.:.||:|.|.|..
Mouse   198 GEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQTSHLSIHHTIHSGEKPYKCSECDKCFTD 262

  Fly   105 KTDLQRHMLIHSDERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHM 169
            |..|::|..||:.|:|:||.:|.|.:.....|:.| ...|...|.:.|::|.|.|..|..||:|.
Mouse   263 KCTLRKHQRIHTGEKPYKCSECDKCFTDKCTLRKH-QRIHTGEKPYKCNECDKCFTDKGSLRVHQ 326

  Fly   170 RLHSGEKPYPCDLCDKKFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVHMERHEQGM 234
            |:|:|||||.|..|||.|.:...|..|...|  :..:.:.|::|...|:....||.|...|....
Mouse   327 RIHTGEKPYKCSECDKCFTQPSHLSIHRRIH--SGEKPYKCSECDKCFTDKCTLRKHQRIHTGEK 389

  Fly   235 EHRCSICENQFANELALRAHINQEHHKLTQFECEICHKMIEPDEDLATHMQRHTAVKTHVCEVCN 299
            .::||.|:..|..:..||.| .:.|.....::|..|.|.......|..|.:.||..|.:.|..|:
Mouse   390 PYKCSECDKCFTEKFTLRKH-QRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCSECD 453

  Fly   300 TYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRKHTGEKPFRCQLC---------- 354
            ..||:.|..::|.|:|:||:||:|..|.:.|...|.|.:|.|.|:||||::|..|          
Mouse   454 KCFTKPSHLSIHRRIHSGEKPYKCSECDKCFTQPSPLSIHRRIHSGEKPYKCSECDKCFTDKGSL 518

  Fly   355 ----------------EDEVAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFFKIKVELQSH----- 398
                            |.:..|:|.:||..|. :||..:|||.|..|...|..|..|:.|     
Mouse   519 RVHQRIHIGEKPYKCSECDKCFTQPSHLSIHC-RIHSGEKPYKCSECDKCFTHKGSLRVHHRIHA 582

  Fly   399 ------VEHCAKCPVD------------GDKP 412
                  ...|.||..:            |:||
Mouse   583 GEKPYKCSECDKCFTEKNGLRRHQRIHTGEKP 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_001097659.1 COG5048 <88..247 CDD:227381 56/175 (32%)
C2H2 Zn finger 95..115 CDD:275368 8/19 (42%)
zf-H2C2_2 107..132 CDD:290200 10/24 (42%)
C2H2 Zn finger 123..144 CDD:275368 5/20 (25%)
C2H2 Zn finger 152..172 CDD:275368 9/19 (47%)
zf-H2C2_2 165..189 CDD:290200 15/23 (65%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
COG5048 <192..369 CDD:227381 57/202 (28%)
C2H2 Zn finger 210..230 CDD:275370 6/19 (32%)
C2H2 Zn finger 238..260 CDD:275371 7/21 (33%)
C2H2 Zn finger 267..287 CDD:275368 5/19 (26%)
C2H2 Zn finger 295..315 CDD:275368 7/19 (37%)
zf-H2C2_2 309..332 CDD:290200 10/22 (45%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..374 CDD:275368 8/48 (17%)
C2H2 Zn finger 382..399 CDD:275368 6/27 (22%)
Rex2NP_001171238.1 KRAB 27..67 CDD:366587
C2H2 Zn finger 197..217 CDD:275368 6/18 (33%)
C2H2 Zn finger 229..245 CDD:275368 1/15 (7%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
COG5048 277..666 CDD:227381 104/343 (30%)
C2H2 Zn finger 281..301 CDD:275368 5/20 (25%)
C2H2 Zn finger 309..329 CDD:275368 9/19 (47%)
C2H2 Zn finger 337..357 CDD:275368 7/19 (37%)
C2H2 Zn finger 365..385 CDD:275368 6/19 (32%)
C2H2 Zn finger 393..413 CDD:275368 7/20 (35%)
C2H2 Zn finger 421..441 CDD:275368 5/19 (26%)
C2H2 Zn finger 449..469 CDD:275368 7/19 (37%)
C2H2 Zn finger 477..497 CDD:275368 7/19 (37%)
C2H2 Zn finger 505..525 CDD:275368 2/19 (11%)
C2H2 Zn finger 533..553 CDD:275368 6/20 (30%)
C2H2 Zn finger 561..581 CDD:275368 6/19 (32%)
C2H2 Zn finger 589..609 CDD:275368 3/19 (16%)
C2H2 Zn finger 617..637 CDD:275368
C2H2 Zn finger 645..665 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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