DRSC/TRiP Functional Genomics Resources

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Protein Alignment Als2 and ARC3

DIOPT Version :10

Sequence 1:NP_649347.1 Gene:Als2 / 40410 FlyBaseID:FBgn0037116 Length:1486 Species:Drosophila melanogaster
Sequence 2:NP_177638.2 Gene:ARC3 / 843839 AraportID:AT1G75010 Length:741 Species:Arabidopsis thaliana


Alignment Length:448 Identity:89/448 - (19%)
Similarity:151/448 - (33%) Gaps:141/448 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   529 AVVAITGLSSPLAELNEESYVTRLFQQPFSIYQLFVQFME----LLVRTQSEYG-EHRVAWSEFA 588
            |::.|...|.||.:.:.:           :|.:.|.|.||    ::|.|..|.. |.:|..:.| 
plant   311 AIICIVASSVPLQKKDVK-----------TILRTFRQTMEYTGDIIVSTVHEPDLEPKVRVTTF- 363

  Fly   589 RHSCISQELAVNTKDFWSSNDRN------PRIVQFRGRHRRVILTSALV-----PLKLVTSGIS- 641
                    ..:::.:..:||..|      |.::....|:|..:.....:     |:.:..|..| 
plant   364 --------FILSSSEVETSNKGNIFSGLVPFVLNIFTRYRSQLQKETNIGLGETPVSIKDSADST 420

  Fly   642 --RSSN----SFILFSDFLCQVSGN---SLY---------------------------------- 663
              ::||    .|.:.|:.|.:||.|   |.|                                  
plant   421 DVKTSNQNIEEFEIDSEDLLEVSENGDDSEYPLKEGEPSRNSRLDLKDENVEDFGAIQREPIANW 485

  Fly   664 ----SYPLTTLWVWTEGDSLRLT----------TPEKSF--LVSTRSQEMRKVWLDQLQSSIIAS 712
                .|.:...|....||:..|:          .|.|..  .:|..||..||.  |..:.|..  
plant   486 SMDQGYQIEQKWQADSGDTAVLSLGIVNLPVGVRPSKKLNSNLSVASQLSRKA--DSREESFF-- 546

  Fly   713 LGKPLGSPVPSYRSTGYEFSREHPKFSRVKACGTWRKGVLHGN----------CYLEYPDGSVYC 767
              .|.||...|..:.....|.::..|::.:........:|...          ..::| .|.::.
plant   547 --NPNGSTKDSSDTASTLLSEKYADFTKQRNLSARASSMLEAERDSSKRWSPILEMQY-RGGLFK 608

  Fly   768 GELQHGIIEGFGKMVIPTTGLYVGNFKGGRFHGHGVYEMHCKDSPESEVYEGNFCEGLFHGHGVM 832
            |..|.|:.||.|::|:....:|.|.:..|:..|.|.:..     ...:|::|.:.|.|.||.|  
plant   609 GRCQGGLPEGKGRLVLGDGSIYDGMWHNGKRSGLGTFYF-----KNGDVFQGTWREDLIHGKG-- 666

  Fly   833 RNNRYIYVGEYQANARSGYGVIEDLVSGDKYMGMFADNKRSGIGSCITNRGDYFEGSF 890
                :.|..:                 ||::...|...|.||.|...:..|:.|.|.|
plant   667 ----WFYFHK-----------------GDRWFANFWKGKASGEGRFYSKSGEIFFGHF 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Als2NP_649347.1 ATS1 <238..>367 CDD:444065
PH-like 616..715 CDD:473070 29/163 (18%)
COG4642 <745..890 CDD:443680 33/154 (21%)
PLN03185 835..>962 CDD:215619 12/56 (21%)
VPS9 1373..1479 CDD:460489
ARC3NP_177638.2 Tubulin_FtsZ_Cetz-like <163..361 CDD:471962 15/60 (25%)
COG4642 <604..728 CDD:443680 32/128 (25%)
Blue background indicates that the domain is not in the aligned region.

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