DRSC/TRiP Functional Genomics Resources

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Protein Alignment Als2 and AT1G27060

DIOPT Version :10

Sequence 1:NP_649347.1 Gene:Als2 / 40410 FlyBaseID:FBgn0037116 Length:1486 Species:Drosophila melanogaster
Sequence 2:NP_174026.1 Gene:AT1G27060 / 839595 AraportID:AT1G27060 Length:386 Species:Arabidopsis thaliana


Alignment Length:358 Identity:84/358 - (23%)
Similarity:126/358 - (35%) Gaps:87/358 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 TDHALYSAKLQANREHMDLQLLRTDVVDMDFCSGSQELFVVLTNGSVQRQATGSGRDVGHPHAWQ 123
            ||..|.:.|||.......|.|.....:.|..|.|: .:..:.:.|.|.....||...:||.    
plant    24 TDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGA-HVIALTSGGKVFTWGRGSSGQLGHG---- 83

  Fly   124 TLGFDPLELHAEGVRIRRVCCSAQGVVFVGASGETY--VMGSCGEVFKAEQQPRHMRLYEEGKEL 186
                |.|.:...    :.|......|:...|:|.::  .:...|.:|                  
plant    84 ----DILNITLP----KLVSFFDDSVITQAAAGWSHSGFVSDSGCIF------------------ 122

  Fly   187 LDLAAGNEHFVMLVAPYNLADDALQLSVASAKEEPEDERASVKSISSG--HSERSVAANTRHLLH 249
               ..||..|..|.     ..|.|.||..:......::  |||.::.|  ||....|.|      
plant   123 ---TCGNGSFGQLG-----HGDTLSLSTPAKVSHFNND--SVKMVACGMRHSLVLFAGN------ 171

  Fly   250 QGYALLHTQLFTFGASNNGLLG-SGDHIRRANV-MRLQKLDSMGVCSIAAGLEHTVARTLDGRLY 312
                    |:..||:...|.|| |.|.|:..|: ..:..|..:.|..|:|..:|:.|.:.||:.:
plant   172 --------QVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFF 228

  Fly   313 HWGLNNHSQLGEDVSSPMEITITENTAALPIEQNSALEATCGDYHTLLLNASGQI----HSLQPA 373
            .||.....  |.||.:|.         :|| ...|..|...|..|.|||...|::    .:|...
plant   229 SWGRGFCG--GPDVHAPQ---------SLP-SPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQ 281

  Fly   374 PPMRHLQQSSTYA----------QTLLQLQLGA 396
            |..:.||..|:.|          ..::|:..||
plant   282 PEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGA 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Als2NP_649347.1 ATS1 <238..>367 CDD:444065 36/130 (28%)
PH-like 616..715 CDD:473070
COG4642 <745..890 CDD:443680
PLN03185 835..>962 CDD:215619
VPS9 1373..1479 CDD:460489
AT1G27060NP_174026.1 ATS1 17..348 CDD:444065 84/358 (23%)
RCC1 323..375 CDD:395335
Blue background indicates that the domain is not in the aligned region.

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