Protein Alignment Als2 and RUG3

DIOPT Version :10

• Sequence 1: NP_649347.1
• Gene: Als2 / 40410
• FlyBaseID: FBgn0037116
• Length: 1486
• Species: Drosophila melanogaster
• Sequence 2: NP_974971.2
• Gene: RUG3 / 836208
• AraportID: AT5G60870
• Length: 452
• Species: Arabidopsis thaliana
• Alignment Length: 254
• Identity: 65/254 - (25%)
• Similarity: 92/254 - (36%)
• Gaps: 71/254 - (27%)

  Fly   104 SVQRQATGSGRDVGHPH-----AWQTLGFDPL-------ELHAEGV------RIRRVCCSAQGVV 150
            |::..|.|....|...|     .|...||..|       ||....|      :|..:..|.....
plant   153 SIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTA 217

  Fly   151 FVGASGETYVMGSCGEVFKAEQQPRHMRLYEEGKELLDLAAGNEHFVMLVAPYNLADDALQLSVA 215
            .:..|||.|:.|.                 |||...|.|..|.       .|    ::...|||
plant   218 AITESGELYMWGR-----------------EEGDGRLGLGPGR-------GP----NEGGGLSV- 253

  Fly   216 SAKEEPEDERA---SVKSISSGHSERSVAANTRHLLHQGYALLHTQLFTFGASNNGLLGSGDHIR 277
                 |...:|   .|.|:|.|      ...|..|..:|      ||:.:||::|..||.||::.
plant   254 -----PSKVKALTVPVASVSCG------GFFTMALTKEG------QLWNWGANSNYELGRGDNLG 301

  Fly   278 RANVMRLQKLDSMGVCSIAAGLEHTVARTLDGRLYHWGLNNHSQLG----EDVSSPMEI 332
            ....|.:..|:.:.:..||.|..|::|.|.:|::..||...|.|||    .:...|.||
plant   302 GWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEI 360

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Als2	NP_649347.1	ATS1	<238..>367	CDD:444065	30/99 (30%)
		PH-like	616..715	CDD:473070
		COG4642	<745..890	CDD:443680
		PLN03185	835..>962	CDD:215619
		VPS9	1373..1479	CDD:460489
RUG3	NP_974971.2	ATS1	50..418	CDD:444065	65/254 (26%)
		RCC1	392..447	CDD:395335