DRSC/TRiP Functional Genomics Resources

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Protein Alignment Als2 and AT5G12350

DIOPT Version :10

Sequence 1:NP_649347.1 Gene:Als2 / 40410 FlyBaseID:FBgn0037116 Length:1486 Species:Drosophila melanogaster
Sequence 2:NP_568268.3 Gene:AT5G12350 / 831110 AraportID:AT5G12350 Length:1075 Species:Arabidopsis thaliana


Alignment Length:352 Identity:81/352 - (23%)
Similarity:123/352 - (34%) Gaps:113/352 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 ELFVVLTNGSVQRQATGSGRD----VGHPHAW------QTLG---------FD-------PLELH 133
            :.|.|..:.:|...:.|||.|    :|....|      ..||         ||       |..|.
plant   239 DAFRVSMSSAVSSSSHGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALE 303

  Fly   134 AEGV-RIRRVCCSAQGVVFVGASGETYVMGSCGE------VFKAEQQPRHM-------------- 177
            :..| .::.:.|..|..|.|...||::..|...|      |....|||:.:              
plant   304 STIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACG 368

  Fly   178 -----------RLYEEGK-ELLDLAAGNE--HFVMLVAPYNLADDALQLSVASAKEEPEDERASV 228
                       .||..|| :...|..|||  |:|.....:.|                  |...|
plant   369 EFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLL------------------EGIHV 415

  Fly   229 KSISSGHSERSVAANTRHLLHQGYALLHTQLFTFGASNNGLLGSGDHIRRANVMRLQKLDSM-GV 292
            .||:.|....:|..:.            .||||||....|:||.||   :.:|...:::||: |:
plant   416 SSIACGPYHTAVVTSA------------GQLFTFGDGTFGVLGHGD---KKSVFIPREVDSLKGL 465

  Fly   293 CSI--AAGLEHTVA------------RTLDGRLYHWGLNNHSQLGEDVSSPMEITITENTAALPI 343
            .::  |.|:.||.|            ....|:|:.||..:..:||.....|   .:.....|..:
plant   466 RTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEP---KLVPTCVAALV 527

  Fly   344 EQNSALEATCGDYHTLLLNASGQIHSL 370
            |.|.. :..||...|:.|..||.::::
plant   528 EPNFC-QVACGHSLTVALTTSGHVYTM 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Als2NP_649347.1 ATS1 <238..>367 CDD:444065 37/143 (26%)
PH-like 616..715 CDD:473070
COG4642 <745..890 CDD:443680
PLN03185 835..>962 CDD:215619
VPS9 1373..1479 CDD:460489
AT5G12350NP_568268.3 PH_PLC_plant-like 19..129 CDD:270171
ATS1 313..648 CDD:444065 65/278 (23%)
FYVE 652..719 CDD:426221
Tropomyosin_1 <869..>906 CDD:403808
BRX_N 911..944 CDD:404581
BRX_assoc 953..1005 CDD:406921
BRX 1006..1061 CDD:429960
Blue background indicates that the domain is not in the aligned region.

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