DRSC/TRiP Functional Genomics Resources

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Protein Alignment Als2 and AT4G17080

DIOPT Version :10

Sequence 1:NP_649347.1 Gene:Als2 / 40410 FlyBaseID:FBgn0037116 Length:1486 Species:Drosophila melanogaster
Sequence 2:NP_193441.5 Gene:AT4G17080 / 827416 AraportID:AT4G17080 Length:513 Species:Arabidopsis thaliana


Alignment Length:406 Identity:102/406 - (25%)
Similarity:152/406 - (37%) Gaps:91/406 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   613 RIVQFRGRHRRVILTSALVPLKLVTSGISRSSNSFIL--FSDFLCQVSGNSLYSYPL--TTLWVW 673
            |::.|   |.|.:|..::.||.:.          |:|  |..||..|.....:|:.|  :..:..
plant   148 RLICF---HLRFLLLLSVPPLYIF----------FLLISFRFFLLFVFSIIAFSFVLSISLKFAL 199

  Fly   674 TEGDSLRL---------TTPEKSFLVSTRSQEMRKVWLDQLQSSIIASLGKPLGSPVPSYRSTGY 729
            ....|:||         .||.:|   |:.|||..|        .:|.|:|   ..||...::.. 
plant   200 PHLPSIRLIIARLLSLKLTPTRS---SSSSQENTK--------HVIWSIG---SKPVTEKKTNS- 249

  Fly   730 EFSREHPKFSRVKACGTWRKGVLHGNCYLEYPDGSVYCGELQHGIIEGFGKMVIPTTGLYVGNFK 794
                           |:|.:         :|..|.||.||...|...|.|.......|.|.|::.
plant   250 ---------------GSWVQ---------KYSSGDVYEGEFHRGKCSGSGVYYYSMKGKYEGDWI 290

  Fly   795 GGRFHGHGVYEMHCKDSPESEVYEGNFCEGLFHGHGVMR-NNRYIYVGEYQANARSGYGVI--ED 856
            .|::.|:|| |...|.|.    |.|.:.:|:.||.|:.| ....:|.||:......|.||.  ||
plant   291 DGKYDGYGV-ETWAKGSR----YRGQYRQGMRHGTGIYRFYTGDVYAGEWSNGQSHGCGVYTSED 350

  Fly   857 LVSGDKYMGMFADNKRSGIGSCITNRGDYFEGSFSGDDLTGSGVAVFENDYYYEGELTLLGPNGR 921
               |.:::|.|....:.|:|......||.:.|.:..|.:.|.||..|.|.:.|||........|.
plant   351 ---GSRFVGEFKWGVKHGLGHYHFRNGDTYAGEYFADRMHGFGVYQFGNGHRYEGAWHEGRRQGL 412

  Fly   922 GEYYMPSGDACGGSGAMG--------TGEFDDTCELIGNKMFGQLSGTWDTVRIQAGELVLNRRF 978
            |.|...:|:...|....|        |...|.:..:..:|:.       |||:.........|..
plant   413 GMYTFRNGETQAGHWEDGVLNCPTEQTTRPDSSFSISHSKVV-------DTVQQARKAAKKAREV 470

  Fly   979 PKYPSSLGRQVVDHNR 994
            .|....:.|.|:..||
plant   471 VKVEERVNRAVMVANR 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Als2NP_649347.1 ATS1 <238..>367 CDD:444065
PH-like 616..715 CDD:473070 27/111 (24%)
COG4642 <745..890 CDD:443680 44/147 (30%)
PLN03185 835..>962 CDD:215619 34/136 (25%)
VPS9 1373..1479 CDD:460489
AT4G17080NP_193441.5 EcfT 156..>219 CDD:469778 14/72 (19%)
COG4642 <250..429 CDD:443680 58/195 (30%)
Blue background indicates that the domain is not in the aligned region.

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