Sequence 1: | NP_649347.1 | Gene: | Als2 / 40410 | FlyBaseID: | FBgn0037116 | Length: | 1486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006239135.1 | Gene: | Rcc1 / 682908 | RGDID: | 1592835 | Length: | 434 | Species: | Rattus norvegicus |
Alignment Length: | 327 | Identity: | 75/327 - (22%) |
---|---|---|---|
Similarity: | 119/327 - (36%) | Gaps: | 84/327 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 91 SGSQELFVVLTNGSVQRQATGSGRDVGHPHAWQTLGFDPLE-------------LHAEGVRIRRV 142
Fly 143 CCSAQGVVFVGASGETYVMGSCGEVFKAEQQPRHMRLYEEGKELLDLAAGNEHFVMLVAPYNLAD 207
Fly 208 DALQLSVASAKE--------EPEDERASVKSISSGHSERSVAANTRHLLHQGYALLHT--QLFTF 262
Fly 263 GASNNGLL----------GSGDHIRRANVMRLQKLDSMGV----------CSIAAGLEHTVARTL 307
Fly 308 DGRLYHWGLNNHSQLGEDVSS----PMEITITENTAALPIEQNSALEATCGDYHTLLLNASGQIH 368
Fly 369 SL 370 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Als2 | NP_649347.1 | RCC1 | 258..304 | CDD:278826 | 15/65 (23%) |
RCC1_2 | 292..321 | CDD:290274 | 9/38 (24%) | ||
RCC1 | 308..361 | CDD:278826 | 15/56 (27%) | ||
PH-like | 616..715 | CDD:302622 | |||
VPS9 | 1373..1479 | CDD:280383 | |||
Rcc1 | XP_006239135.1 | ATS1 | 19..432 | CDD:227511 | 75/327 (23%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |