DRSC/TRiP Functional Genomics Resources

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Protein Alignment Als2 and jph1b

DIOPT Version :10

Sequence 1:NP_649347.1 Gene:Als2 / 40410 FlyBaseID:FBgn0037116 Length:1486 Species:Drosophila melanogaster
Sequence 2:NP_001037813.1 Gene:jph1b / 556485 ZFINID:ZDB-GENE-060616-389 Length:673 Species:Danio rerio


Alignment Length:453 Identity:101/453 - (22%)
Similarity:163/453 - (35%) Gaps:117/453 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   759 EYPDGSVYCGELQHGIIEGFGKMVIPT-TGLYVGNFKGGRFHGHGVYEMHCKDSPESEVYEGNFC 822
            ::.||..:||..:.|...|.|....|. .|.|.|::..| |...|||..     |....|:|.:.
Zfish     7 DFDDGGTFCGGWEDGKAHGHGICTGPKGQGEYSGSWSNG-FEVVGVYTW-----PSGNTYKGYWA 65

  Fly   823 EGLFHGHGVMRNNRYIYVGEYQANARSGYGVIEDLVSGDKYMGMFADNKRSGIGSCITNRGDYFE 887
            :|..||.||....|::|.||:....:..|||.:.|.:..:|.|.:::..:.|.|......|..::
Zfish    66 QGKRHGLGVESKGRWLYRGEWSHGFKGRYGVRQSLNTPARYEGTWSNGLQDGYGVETYGDGGTYQ 130

  Fly   888 GSFSGDDLTGSGVAVFENDYYYEGELTLLGPNGRGEYYMPSGDACGGSGAMGTGEFDDTCELIGN 952
            |.:.|....|.||   .....| |..|::....|........:...||             ::.:
Zfish   131 GQWMGGMRHGYGV---RQSVPY-GMATVIRSPLRTSLASLRSEQSNGS-------------VLHD 178

  Fly   953 KMFGQLSGTWDTVRIQAGELVLNRRFPKYPSSLGRQVVDHNRK--WR--SLFNNF----ESDLAN 1009
            .|....:||       .|..|||     :.|.  .:||...:|  :|  |||.:.    :|| :.
Zfish   179 HMSDSPAGT-------RGGFVLN-----FHSD--SEVVSGKKKGLFRRGSLFGSLKQLRKSD-SR 228

  Fly  1010 CTASTSSSGGNQSAGTLRKSSKPTLSTAQI---------------------------W-----NC 1042
            .:.|:..|.....|...|.||....||...                           |     |.
Zfish   229 SSISSKRSSARSDATMSRISSSDANSTISFGDGEVADEYMPAEDNVDATTTESYLGEWKNDKRNG 293

  Fly  1043 IAV------------YMSKQR-------AREGTK-PGNYFNNILLS------LPLPQ-KTSSPLA 1080
            ..|            :::.:|       ..:||| .|.|.||:|:.      :||.. ||...:.
Zfish   294 FGVSERSNGMKYEGEWINNKRHGYGCTMFPDGTKEEGKYKNNVLVRGIKKQLIPLKNTKTKQKVD 358

  Fly  1081 KA---RTTTSALSKLQTEAASALDFLGFPPRRIQSQEALNSKPGGLQRADSLISMGHNTSRDL 1140
            :|   ....||:::.:.|.|::..    ...|.:::.|..:.....|.:|    :....:|||
Zfish   359 RAVEGAIRASAIARTKVEIATSRT----AHARAKAEAADQASLSASQESD----LARAVARDL 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Als2NP_649347.1 ATS1 <238..>367 CDD:444065
PH-like 616..715 CDD:473070
COG4642 <745..890 CDD:443680 38/131 (29%)
PLN03185 835..>962 CDD:215619 26/126 (21%)
VPS9 1373..1479 CDD:460489
jph1bNP_001037813.1 COG4642 <2..143 CDD:443680 40/141 (28%)
PLN03185 38..>342 CDD:215619 76/341 (22%)
Blue background indicates that the domain is not in the aligned region.

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