DRSC/TRiP Functional Genomics Resources

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Protein Alignment Als2 and CG7420

DIOPT Version :10

Sequence 1:NP_649347.1 Gene:Als2 / 40410 FlyBaseID:FBgn0037116 Length:1486 Species:Drosophila melanogaster
Sequence 2:NP_001259871.1 Gene:CG7420 / 33332 FlyBaseID:FBgn0031344 Length:388 Species:Drosophila melanogaster


Alignment Length:374 Identity:78/374 - (20%)
Similarity:129/374 - (34%) Gaps:114/374 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PAS-RICSNAGGELLLLTTDHALYSA--------KLQANRE-HMDLQLLRTDV-----VDMDFC- 90
            ||. |:....||.:|:|.|...:::.        .|.:..| |.:.:::.|:.     |:...| 
  Fly    36 PAQVRLIRGGGGHVLILDTSGRIHACGWNNRGQLGLDSTEECHSEFKMIPTEYFGDVPVETISCG 100

  Fly    91 ---SG----SQELFVVLTN-----GSVQRQATGSGRDVGHPHAWQTLGFDPLELHAEGVRIRRVC 143
               ||    ::.|||..:|     |..||..|...|.:            |::|..| ...:|:.
  Fly   101 WDISGAITLTKRLFVWGSNAFQQLGICQRGFTAVRRPM------------PVKLPRE-EPAQRIS 152

  Fly   144 CSAQGVVFVGASGETYVMG--------------------SCGEVFKAEQQPRHMRLYEEGKELLD 188
            ...:....:....:.||.|                    .|..|......|..:|       ::.
  Fly   153 FGLRHCAVLTQDNKIYVFGRLRIMDPPPIELDITATCLHRCNTVKIQVHNPNELR-------IVS 210

  Fly   189 LAAGNEHFVMLVAPYN------------LADDALQLSVASAKEEPEDERASVKSISSGHSERSVA 241
            :::|..|.|:..|..:            |.|:....|.|...||      .|:.::.|.:     
  Fly   211 ISSGQNHMVLKCADLSETGGGSTKRILTLGDNKFGQSNAFQFEE------DVRQLAVGWT----- 264

  Fly   242 ANTRHLLHQGYALLHTQLFTFGASNNGLLGSGDHIRRANV---MRLQKLDSMGVCSIAAGLEHTV 303
                   |....|.:.::..:|.:..|.||.|....:..:   :||:..:..|...|..|.||.:
  Fly   265 -------HNAAVLKNNEILVWGRNCYGQLGMGSFSEQQAIPTPLRLKLPEDQGPARIHMGAEHGL 322

  Fly   304 ARTLDGRLYHWGLNNHSQLGEDVSSPMEITITENTAALPIEQNSALEAT 352
            .||..|.:|.||.|.|...|.:        .|||     :..||...||
  Fly   323 LRTTAGEVYTWGWNEHGNCGNN--------STEN-----LHPNSFTTAT 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Als2NP_649347.1 ATS1 <238..>367 CDD:444065 30/118 (25%)
PH-like 616..715 CDD:473070
COG4642 <745..890 CDD:443680
PLN03185 835..>962 CDD:215619
VPS9 1373..1479 CDD:460489
CG7420NP_001259871.1 ATS1 3..348 CDD:444065 72/357 (20%)
Blue background indicates that the domain is not in the aligned region.

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