DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Als2 and Eea1

DIOPT Version :9

Sequence 1:NP_649347.1 Gene:Als2 / 40410 FlyBaseID:FBgn0037116 Length:1486 Species:Drosophila melanogaster
Sequence 2:XP_006513585.1 Gene:Eea1 / 216238 MGIID:2442192 Length:1458 Species:Mus musculus


Alignment Length:478 Identity:96/478 - (20%)
Similarity:167/478 - (34%) Gaps:130/478 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   995 KWRSLFNNFESDLANCTASTSSSGGNQSAGTLRKSSKPTLSTAQIWNCIAVYMSKQRAREGT--- 1056
            |:.:..|...|:||.         |.|.                    :|||:.:.:..:|:   
Mouse   311 KFEATINQLRSELAK---------GPQE--------------------VAVYVQEIQKLKGSINE 346

  Fly  1057 ---KPGNYFNNI----LLSLPLPQKTSSPLAKARTTTSALSKLQTEAASALDFLGFPPRRIQSQE 1114
               |..|....:    |....|.:|.:...|..:|..::|.:...:..             |.|.
Mouse   347 LTQKNQNLTEKLQKKDLDYTHLEEKHNEESASRKTLQASLHQRDLDCQ-------------QLQA 398

  Fly  1115 ALNSKPGGLQRADSLISMGHNTSRDLDNSSLASFQLDQSL--MNST---VNGDESSTFNESFSKL 1174
            .|.:....||||..          :|...:.|:.:|.:.|  :.||   :..:......:...|.
Mouse   399 RLTASESSLQRAQG----------ELSEKAEAAQKLREELREVESTRQHLKVEVKQLQQQREEKE 453

  Fly  1175 SHNNNNSISKHMNNIDCSITSTT----STTSAVLDQVPSFGMALVLTEQDVTSIRLYLEQAFKDR 1235
            .|  ...:...::.:.|.:..|.    .....:.:|.......|:..||.|..::|.|.:..:. 
Mouse   454 QH--GLQLQGEVSQLHCKLLETERQLGEAHGRLKEQRQLSSEKLMEKEQQVADLQLKLSRLEEQ- 515

  Fly  1236 HHPLYVLNERIANCFHYSYGYWKVKPTPILAKQAMREWESISRRIYRFVRKMFPALPEELCQMEG 1300
                  |.|::.|.....:...|       :||..:|.:::.:.....:|:....|.:.|.|:..
Mouse   516 ------LKEKVTNSTELQHQLEK-------SKQQHQEQQALQQSATAKLREAQNDLEQVLRQIGD 567

  Fly  1301 SREVISHITLLYPLVLSEGIYSTLFV------LYA------------NKYSRKDEMYRQNL-NLA 1346
            ..:.|.::..|    |.:|..|...:      |||            |:...|:...:|.| .|.
Mouse   568 KDQKIQNLEAL----LQKGKESVSLLEKEREDLYAKIQAGEGETAVLNQLQEKNHALQQQLTQLT 628

  Fly  1347 EKLKDQELVELMGHESFLHNVMLDPKF--------VESVQT--------LKELQEKFSPQDMLTV 1395
            ||||:|........|: ||:.:.:.|.        |.|::|        |.|.:||.|..|:  .
Mouse   629 EKLKNQSESHKQAEEN-LHDQVQEQKAHLRAAQDRVLSLETSVSELSSQLNESKEKVSQLDI--Q 690

  Fly  1396 IQRSTQLLTEAYEHAMAANAAQL 1418
            |:..|:||..| |.|.||..|.|
Mouse   691 IKAKTELLLSA-EAAKAAQRADL 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Als2NP_649347.1 RCC1 258..304 CDD:278826
RCC1_2 292..321 CDD:290274
RCC1 308..361 CDD:278826
PH-like 616..715 CDD:302622
VPS9 1373..1479 CDD:280383 20/62 (32%)
Eea1XP_006513585.1 SMC_prok_B <130..794 CDD:274008 96/478 (20%)
Smc 504..1346 CDD:224117 55/231 (24%)
FYVE_EEA1 1394..1456 CDD:277269
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.