Sequence 1: | NP_649347.1 | Gene: | Als2 / 40410 | FlyBaseID: | FBgn0037116 | Length: | 1486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001171421.1 | Gene: | Rpgr / 19893 | MGIID: | 1344037 | Length: | 1039 | Species: | Mus musculus |
Alignment Length: | 738 | Identity: | 152/738 - (20%) |
---|---|---|---|
Similarity: | 259/738 - (35%) | Gaps: | 216/738 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 122 WQTLGFDPLELHAEGVRIRRVCCS-----AQGVVFVG---ASGETYVMGSCGEVFK------AEQ 172
Fly 173 QPRHMRLYEEGKELLDLAAGNEHFVMLVAPYNL----ADDALQLSVASAKE----------EPED 223
Fly 224 ERASVKSISSGHSERSVAANTRHLLHQGYALLHTQLFTFGASNNGLLGSGDHIRR---ANVMRLQ 285
Fly 286 KLDSMGVCSIAAGLEHTVARTLDGRLYHWGLNNHSQLG-EDVSS---PMEITITENTAALPIEQN 346
Fly 347 SALEATCGDYHTLLLNASGQIHSL-QPAPPMRHLQQSSTYAQTLLQLQLGAAWPRQLRLLMCSGG 410
Fly 411 YTL---------------------------QNQRQFQRQYHYYLSH---------LQSQLQLLL- 438
Fly 439 ----KHRQAVQTLEIWQRQSALEPLSALGPLLINWERILCLLVATLHSLEGFYRADFVQPADLLF 499
Fly 500 ICHYKEYIDLFDGYTKAYCDVFSVNGFGEAVVAITGLSSPLAELNEE------------------ 546
Fly 547 SYVTRLFQQPFS-IYQLFV---------QFMELLVRTQSEYGEHRVAWSEFARHSCISQELAVNT 601
Fly 602 KDFWSSNDRNPRIVQFRGRHRRVILTSALVPLKLVTSGISRSSNSFIL-FSDFLCQVSGNS---- 661
Fly 662 LYSYPLT---TLWVWTEGDSLRLTTPEKSFLVS----TRSQEMRKVW--------LDQLQSSIIA 711
Fly 712 SLGKPLGSPVPSYRSTGYEFSRE 734 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Als2 | NP_649347.1 | RCC1 | 258..304 | CDD:278826 | 11/48 (23%) |
RCC1_2 | 292..321 | CDD:290274 | 10/28 (36%) | ||
RCC1 | 308..361 | CDD:278826 | 21/56 (38%) | ||
PH-like | 616..715 | CDD:302622 | 22/118 (19%) | ||
VPS9 | 1373..1479 | CDD:280383 | |||
Rpgr | NP_001171421.1 | RCC1_2 | 78..104 | CDD:290274 | 5/25 (20%) |
RCC1 | 93..139 | CDD:278826 | 9/49 (18%) | ||
RCC1 | 144..193 | CDD:278826 | 11/50 (22%) | ||
RCC1_2 | 180..209 | CDD:290274 | 10/28 (36%) | ||
RCC1 | 196..243 | CDD:278826 | 21/56 (38%) | ||
RCC1 | 246..296 | CDD:278826 | 11/51 (22%) | ||
RCC1 | 301..348 | CDD:278826 | 2/46 (4%) | ||
RCC1 | 352..398 | CDD:278826 | 11/56 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |