DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Als2 and HERC2

DIOPT Version :10

Sequence 1:NP_649347.1 Gene:Als2 / 40410 FlyBaseID:FBgn0037116 Length:1486 Species:Drosophila melanogaster
Sequence 2:XP_061516765.1 Gene:HERC2 / 1280824 VectorBaseID:AGAMI1_012955 Length:5199 Species:Anopheles gambiae


Alignment Length:1785 Identity:334/1785 - (18%)
Similarity:574/1785 - (32%) Gaps:630/1785 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 ICSNAGGELLLLTTDHAL------YSAKLQANREHMDLQLLRTDVVDM-DFCSGSQELFVVLTNG 103
            |.:::|..|.|   .||:      |.|:::.         |...:|.: ..|.| :.:..:.::|
Mosquito   619 ILTDSGTVLYL---SHAISMTEDNYPAQVKG---------LECTIVQLAAHCEG-RHVLALASSG 670

  Fly   104 SVQRQATGSGRDVGHPHAWQTLGFD-PLELHAEGVR-IRRVCCSAQGVVFVGASGETYV--MGSC 164
            .|....:|.|..:||   ..|...: |..:.|...| :..|.|.:.....:.||||.|.  .|:.
Mosquito   671 DVYSWGSGDGGRLGH---GDTSAKELPTRITALADRQVTGVFCGSSYSAAITASGELYTWGRGTY 732

  Fly   165 GEVFKAEQQPRHM-----RLYEEGKELLDLAAGNEHFVMLVAPYNLA-------------DDALQ 211
            |.:.....:.:::     .|.......:.|..|:.| .:.|....||             :..:.
Mosquito   733 GRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAH-SLCVTEAGLAFAWGDGDFGKLGNESCVG 796

  Fly   212 LSVASAKEEPEDERASVKSISSGHSERSVAANTRHLLHQGYALLHTQLFTFGASNNGLLGSGDHI 276
            .||....:.|  :.:.|..:.|| |:.|||     |..:|      .::|:|..:.|.||.|:..
Mosquito   797 TSVPVQVDLP--QASCVVKVFSG-SQFSVA-----LTREG------TVYTWGKGHGGRLGHGNSE 847

  Fly   277 RRANVMRLQKLDSMGVCSIAAGLEHTVARTLDGRLYHWGLNNHSQL------------------- 322
            .......:|.|:...:..:|.||.|.:|.|..|.||.||.|:..|:                   
Mosquito   848 HSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQICPECVTRDPIITAPILTTP 912

  Fly   323 ------------------------GEDVSSPMEITITENTAALPIEQNSAL-------------- 349
                                    |.....|..:.::|:|..| ::|...:              
Mosquito   913 PTLRVAGMAAGVAQSLFWCHSSSHGIPAKIPFVVDLSEHTFRL-LDQLLCMVSVTSSTDASRHPP 976

  Fly   350 --EATC------------------GDYH----------TLLLNASGQIHSLQPAP-PMRHLQQSS 383
              ||.|                  .:.|          .||.:...:|.||...| .::.:|:::
Mosquito   977 SQEAECIAVATLNLLRLQLHAMIVNNVHPRQVGLVEGSRLLASLKTRILSLAGGPVVLKTMQEAA 1041

  Fly   384 TY----------------AQTLLQL---------QLGAAWPRQ----------LRLLMCSGGYTL 413
            .:                ||||..|         .:|:|....          :..||..||...
Mosquito  1042 QWTLQVGWSIILPTASERAQTLTSLLPAGHDGGATIGSAAQTSAGHRFMTDLLVGSLMAEGGLQT 1106

  Fly   414 ---------QNQRQFQRQ--------YHYYLSHLQSQLQLLLKHRQAVQTLEIWQRQ-------- 453
                     |:|..||.|        .|..|.||   |:.||::..::....:.|..        
Mosquito  1107 ALNQAINHHQHQNPFQAQEPHGAGSGTHLSLLHL---LKQLLRNNSSLTQARLGQLMLGPYLKPD 1168

  Fly   454 ---SALEPLSALGPLLINWERILCLLVATLHSLEGFYRADFVQPADLLFICHYKEYIDLFDGYTK 515
               ||.||.|....||..::|   ||::.|::    .:||.:..|:.|...:.::.:        
Mosquito  1169 DGFSAPEPTSPSLDLLHKFQR---LLLSHLYA----SKADDLSGAEALLYTYIQQLV-------- 1218

  Fly   516 AYCDVFSVNGFGEAVVAITGLSSPLAELNEESYVTRLFQQPFSIYQLFVQFMELLVRTQS----- 575
            ..|    ||...:|...|         |..:..||.:.:...|...|:...:.|:|..|.     
Mosquito  1219 GPC----VNTLAKAYETI---------LQGKDGVTEILRNDISDALLYELLIGLVVIQQDKPFLL 1270

  Fly   576 ---EYGEHRV----AWSEFARHSCISQELAV-NTKDF-WSSNDRNPRIVQFRGRHRRVILTSALV 631
               ::..|.:    |...|.|   ::||..: :|.|. |      |.||. ||       .|..:
Mosquito  1271 ANFDWNRHLIPLLNALDGFNR---LTQEGELQDTDDMGW------PGIVS-RG-------ASKAM 1318

  Fly   632 PLKLVTSGISRSS-NSFILFSDFLCQVSGNSLYSYPLTTLWVWTEGD--SLRLTTPEKSFLVSTR 693
            |::.....|.||. ::.:  .|..|               ||...|:  .::..||:.:.     
Mosquito  1319 PVQEEPVLIRRSDIDNHV--RDGGC---------------WVIINGNVYDVKDYTPDNAL----- 1361

  Fly   694 SQEMRKVWLDQLQSSIIASLGKPLGSPVPSYRSTGYEFSREHPKFSRVKACGTWRKGV------- 751
            :||:       ||:.....:...:|:|   ...|.:||...:.:..|......:....       
Mosquito  1362 TQEL-------LQAHAGKDISLEIGNP---QHRTAFEFITSYLRVGRYAVSEMYDSTANPRPLVT 1416

  Fly   752 ---LHGNCYLEYPDGSVYCGELQHGIIEGFGKMVIPTTGLYVGNFKGGRFHGHGVYEMHCKDSPE 813
               .|..|.|.|..|       |...|...|..:.|.                   |:.|::...
Mosquito  1417 LTHFHSECLLAYLLG-------QRASILQVGSPLQPA-------------------ELQCRNLLN 1455

  Fly   814 SEVYEGNFCEGLFHGHGVMR-NNRYIYVGEYQANARSGYGVIED----------LVSGD--KYMG 865
            |.|..|        |..|:: :|.:   .|.:..|||.......          :|.||  ..||
Mosquito  1456 SHVLSG--------GLQVLQPSNPF---DEEKGEARSSGSTAGSTPTDASAQLPIVGGDGVPMMG 1509

  Fly   866 ---MFADNKRSGIGSCITNRGDYFEGSFSGDDLTGSGVAVFENDYYYEGEL-------------- 913
               |....:|  :.:.:.|.|   ||..: |.|..|.:.:.|. |..|..|              
Mosquito  1510 SWPMVLITQR--VDTLLANLG---EGKIT-DPLVASWIGLCER-YCKEHHLIWHQEFPPEHPVIE 1567

  Fly   914 -------TLLGPNGRGEYYMPSGD-ACGGSGAMGTGEFDDTCELIGN------KMFGQLSGTWDT 964
                   .|:.....|...:...| ...||||............:..      ||..||:.::..
Mosquito  1568 LERLLMAVLIRHQALGPLALAVIDRELSGSGAKPPPPIVTIIRTVHQTKWAIVKMRQQLNRSYKE 1632

  Fly   965 VRIQAGELVLNRRFPKY---PS------SLGRQVVDHN-RKWRSLFNNF---------------- 1003
            |   ...::...||..|   ||      .|.|..:.|. .::::|....                
Mosquito  1633 V---CAPMIDKCRFLLYEIRPSVSLEQHGLERLHIPHRPPRFKALVRRIIAEMRAAKRQLKLACA 1694

  Fly  1004 -ESDLANCT-ASTSSSGGNQS------AGTLRKSSKPTLSTAQIWNCIAVYMSKQRAREGTKPGN 1060
             ..|:.|.| .|..|||..||      .|..::..:..:|.|      .|.:|.:         |
Mosquito  1695 KPEDIVNATIQSQLSSGKIQSYENLSGCGINKQQQQHLVSVA------GVALSTE---------N 1744

  Fly  1061 YFNNILLSLPLPQ---------------KTSSPLAKARTTTSALSKLQTEAASALDFLGFPPRRI 1110
            ..|..|:.:...:               :::||:...|:.:.|||||.:...:.||..|..|...
Mosquito  1745 LVNESLIKVASLESLSTSGHVHRRASVDRSASPVILHRSNSPALSKLASSNENLLDADGPQPGDG 1809

  Fly  1111 QSQEALNSKPGGLQRADSLISMGHNTSRDLDNSSLASFQLDQSL---------MNSTVNGDESST 1166
            .:...:....|........:..|.|.:.: .|....:|..|:.:         .:.|..|..:.|
Mosquito  1810 TNTNTVGGGGGVAVDVTGTLEPGDNATVE-GNEKKITFTNDEQIKTPTNEMIEFHGTAGGKTAKT 1873

  Fly  1167 FNESFSKLSHNNNNSISKHMNNIDCSITS-TTSTTSAVLDQVPSFGMALVLTEQ-DVTSIR--LY 1227
               :|.:...:..|::..:::: .|.:.| .....:.:..||..|    :|.:| ||.::|  :|
Mosquito  1874 ---AFPQDGDDFLNNVIANLSD-KCLLESYPVEFKTGISQQVVDF----ILHDQCDVETLRRAMY 1930

  Fly  1228 LE-QAFKDRHHPLYVLNE--RIANCF--------------HYSYGYWKVKPTPILAKQAMREWES 1275
            .: |.::.|...|.:.:|  |||..|              |..:|                    
Mosquito  1931 CQIQRYQLRKQGLEMFHELLRIAGLFDAVQYNLFNGFLGLHLGHG-------------------- 1975

  Fly  1276 ISRRIYRFVRKMFPALPEELCQMEGSR-EVISHITLLYPLVLSEGIYSTLFVLYANKYSRKDEMY 1339
                   .||.          |..||. |.:.|:                     .:..|:.|..
Mosquito  1976 -------CVRN----------QTVGSNGESVPHV---------------------QQQQRESEHV 2002

  Fly  1340 RQNLNLAEKLKDQELVELMGHESFLHNVMLD-PKFVESVQTLKELQEKFSPQD------------ 1391
            ..|||:....:..::  |:.|...:...:|: .|:|.        |:|.:.:.            
Mosquito  2003 LDNLNMITAYQKADI--LIAHAKIVEWAVLELQKYVN--------QDKINGRHRTHGEKDNSNLG 2057

  Fly  1392 ---MLTVIQRSTQLLT---------EAYEHAMAANAAQLNADNMIPLTMLTMLRAAVPHLGAEL- 1443
               .|..:.|:..||:         ||.|.::..||..|.       :::.:||    ..||:: 
Mosquito  2058 TYVFLKKLPRARFLLSIFGILSRTYEANELSLLINAGILG-------SIMGLLR----QTGADMP 2111

  Fly  1444 ---------ALLDDLTGGPNFQAEMNGMAG 1464
                     .:.:|:.  .|.::...|::|
Mosquito  2112 SSKNTSDTSVIYEDVV--TNLKSSKEGLSG 2139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Als2NP_649347.1 ATS1 <238..>367 CDD:444065 38/215 (18%)
PH-like 616..715 CDD:473070 18/101 (18%)
COG4642 <745..890 CDD:443680 32/170 (19%)
PLN03185 835..>962 CDD:215619 34/169 (20%)
VPS9 1373..1479 CDD:460489 21/126 (17%)
HERC2XP_061516765.1 None

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