DRSC/TRiP Functional Genomics Resources

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Protein Alignment Als2 and als2cl

DIOPT Version :9

Sequence 1:NP_649347.1 Gene:Als2 / 40410 FlyBaseID:FBgn0037116 Length:1486 Species:Drosophila melanogaster
Sequence 2:XP_002939412.3 Gene:als2cl / 100492185 XenbaseID:XB-GENE-993049 Length:971 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Als2NP_649347.1 RCC1 258..304 CDD:278826
RCC1_2 292..321 CDD:290274
RCC1 308..361 CDD:278826
PH-like 616..715 CDD:302622
VPS9 1373..1479 CDD:280383
als2clXP_002939412.3 PH-like 250..349 CDD:418428
PLN03185 385..>536 CDD:215619
COG4642 506..>589 CDD:226989
VPS9 862..962 CDD:366977
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I10853
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 297 1.000 Inparanoid score I2674
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D25604at33208
OrthoFinder 1 1.000 - - FOG0002992
OrthoInspector 1 1.000 - - otm49092
Panther 1 1.100 - - O PTHR46089
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.070

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