DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr78E and Lcp3

DIOPT Version :9

Sequence 1:NP_649345.1 Gene:Cpr78E / 40408 FlyBaseID:FBgn0037114 Length:137 Species:Drosophila melanogaster
Sequence 2:NP_001260803.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster


Alignment Length:135 Identity:34/135 - (25%)
Similarity:55/135 - (40%) Gaps:42/135 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILIVALSLCTAVVLSAPVDHVTSTTQPPVAILESSHEKHEDGSYNFSYLGEDGTHRREEAVV 65
            |||||:|. ||...|..:|.|:           :.|..::...||..:...| :||:        
  Fly     1 MFKILLVC-SLAALVAANANVE-----------VKELVNDVQPDGFVSKLVL-DDGS-------- 44

  Fly    66 RNQGTENEYLEISGSYSYFDANGQEVTVTYKADDHGFVPEGGAILPQISLAAKQVSEQVPQPDLD 130
            .:..|.:.:..|.|.:.:....|..|.|:||||::|:.|:               |:.:|.|   
  Fly    45 ASSATGDIHGNIDGVFEWISPEGVHVRVSYKADENGYQPQ---------------SDLLPTP--- 91

  Fly   131 YAKPP 135
               ||
  Fly    92 ---PP 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr78ENP_649345.1 Chitin_bind_4 47..102 CDD:278791 13/54 (24%)
Lcp3NP_001260803.1 Chitin_bind_4 40..81 CDD:278791 13/49 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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