DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alg11 and SPS3F

DIOPT Version :10

Sequence 1:NP_649340.1 Gene:Alg11 / 40402 FlyBaseID:FBgn0037108 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_171984.2 Gene:SPS3F / 839382 AraportID:AT1G04920 Length:1062 Species:Arabidopsis thaliana


Alignment Length:207 Identity:56/207 - (27%)
Similarity:90/207 - (43%) Gaps:37/207 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 IILSVGQFRPEKDHPLQLQAIYELRTLLAQDEALWNQIKLVIVGSCRNEDDYERLK--NMQDLTK 344
            :||::.:..|:|:....|:|..|.|.|    ..|.|  ..:|:|   |.||.:.|.  |...||.
plant   486 MILALSRPDPKKNITTLLKAFGECRPL----RELAN--LTLIMG---NRDDIDELSSGNASVLTT 541

  Fly   345 HLSLENNVQFSVNVPY------EDLLKLYQ----TAHIGIHTMWNEHFGIGIVESMAAGLIMVAH 399
            .|.|.:......:|.|      .|:..:|:    |..:.|:....|.||:.::|:.|.||.|||.
plant   542 VLKLIDKYDLYGSVAYPKHHKQSDVPDIYRLAANTKGVFINPALVEPFGLTLIEAAAHGLPMVAT 606

  Fly   400 KSGGPLLDIVETSAGSQNGFLAT--DAVEYAENILNIIVNNS-----EMNGIRNAARASVERFSE 457
            |:|||    |:......||.|..  |....|..:|.::...:     .:||.:|     :..||.
plant   607 KNGGP----VDIHRALHNGLLVDPHDQEAIANALLKLVSEKNLWHECRINGWKN-----IHLFSW 662

  Fly   458 QEFEKNFLRAVS 469
            .|..:.:|..::
plant   663 PEHCRTYLTRIA 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg11NP_649340.1 GT4_ALG11-like 44..463 CDD:340835 55/199 (28%)
SPS3FNP_171984.2 sucrsPsyn_pln 1..1058 CDD:274147 56/207 (27%)

Return to query results.
Submit another query.