DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alg11 and AT1G19710

DIOPT Version :10

Sequence 1:NP_649340.1 Gene:Alg11 / 40402 FlyBaseID:FBgn0037108 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_173401.1 Gene:AT1G19710 / 838559 AraportID:AT1G19710 Length:479 Species:Arabidopsis thaliana


Alignment Length:453 Identity:82/453 - (18%)
Similarity:150/453 - (33%) Gaps:134/453 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 GGGERVLWC----------AVRALQEKYQNARMVIYTGDIDASPNSILQKAKNVFNIAVD----- 106
            |....|:|.          .::.|:.|..:..:.:.:.....:.::.|:....|.|.||.     
plant   104 GVESEVVWITNQKPVEEDEVIKVLEHKMLDRGVQVISAKSQKAIDTALKSDLVVLNTAVAGKWLD 168

  Fly   107 ---SDNVKFVFLKQRHWIEAKNYPHFTLLGQSIGSMVVGLEALCRFPPDIYIDTMGYAFTYPLFR 168
               .|||..|..|...||.... .|:                   |.||:               
plant   169 AVLKDNVPKVLPKVLWWIHEMR-GHY-------------------FKPDL--------------- 198

  Fly   169 YLAQSKVGCYVHYPVISTDMLKRVQQRQMSHNNKKYVARNPFLTWTKLAYYRLFSRMYKWVGCCA 233
                     ..|.|.::..|:.       ||...:|        |....:.||..:|.|      
plant   199 ---------VKHLPFVAGAMID-------SHATAEY--------WKNRTHDRLGIKMPK------ 233

  Fly   234 ETIMV---NSSWTENHILQLWDVPFKTHRVYPPCEVSHLKSLQHTE-------KGDEFIILSVGQ 288
             |.:|   ||.       :|.:|          .|.|..|::...:       :.::.:...:..
plant   234 -TYVVHLGNSK-------ELMEV----------AEDSFAKNVLREQVRESLGVRNEDILFGIINS 280

  Fly   289 FRPEKDHPLQLQAIYELRTLLAQDEAL-WNQIKLVIVGSCRN-EDDYERLKNMQDLTKHLSLENN 351
            ....|...|.|:|.:|...::.:.:.| ...:..|:|||..: :..:|  ..:::..:.:.|:..
plant   281 VSRGKGQDLFLRAFHESLKVIKETKKLEVPTMHAVVVGSDMSAQTKFE--TELRNFVQEMKLQKI 343

  Fly   352 VQFSVN-----VPY---EDLLKLYQTAHIGIHTMWNEHFGIGIVESMAAGLIMVAHKSGGPLLDI 408
            |.| ||     .||   .|:|.....|.       .|.||...:|:||..|.::...:||.:..:
plant   344 VHF-VNKTMKVAPYLAAIDVLVQNSQAR-------GECFGRITIEAMAFKLPVLGTAAGGTMEIV 400

  Fly   409 VETSAGSQNGFLATDAVEYAENILNIIVNNSEMNGIRNAARASVERFSEQEFEKNFLRAVSTL 471
            |..:.|..:.......:..|:||:.:..|....|   ...:...||..|...|.:....::::
plant   401 VNRTTGLLHNTGKDGVLPLAKNIVKLATNVKMRN---TMGKKGYERVKEMFLEHHMSHRIASV 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg11NP_649340.1 GT4_ALG11-like 44..463 CDD:340835 82/443 (19%)
AT1G19710NP_173401.1 Glyco_trans_4_5 75..254 CDD:465332 40/232 (17%)
GT4_PimA-like 103..462 CDD:340831 82/453 (18%)

Return to query results.
Submit another query.