DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alg11 and algn-1

DIOPT Version :9

Sequence 1:NP_001262182.1 Gene:Alg11 / 40402 FlyBaseID:FBgn0037108 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_498420.2 Gene:algn-1 / 175920 WormBaseID:WBGene00020820 Length:491 Species:Caenorhabditis elegans


Alignment Length:495 Identity:98/495 - (19%)
Similarity:169/495 - (34%) Gaps:154/495 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 VIYTGDIDASPNSILQKAKNVFNIAVDSDNVKFV-FLKQRHWIEAKNYPHFTLLG--------QS 135
            |:..||:..||. :...||   .:|.:..:||.: |.......:..|:|...::|        .|
 Worm    17 VVVLGDVGRSPR-MCNHAK---MLADEGFDVKLIGFFDSIPGEQIMNHPRIKIVGIPPPPDFMDS 77

  Fly   136 IGSMV-VGLEALCRF-----------------------PPDIYIDTMGYAFTYPLFRYLAQSKVG 176
            :.:.| :.|:....|                       ||  .:.||...|.:.:|:: |:..:.
 Worm    78 LPAFVQLPLKLFWNFITLFLALAFQTSAFNLRIILMQNPP--ALPTMIVCFMFSIFKF-AKFSID 139

  Fly   177 CYVH-YPVISTDMLKRVQQRQMSHNNKK-----YVARNPFLTWT--KLAYYRLFSRMYKWVGCCA 233
            .:.: |.::....  ::...|:..|:||     .|....||...  ||:.|.|          |.
 Worm   140 WHNYMYSILQNKY--QLTDDQVFGNDKKTKKAQIVRCVGFLEGLCGKLSDYNL----------CV 192

  Fly   234 ETIMVNSSWTENHILQLWDVPFKTHRVYPPC---------EVSHL--------KSLQH------- 274
            ...|      ...::..|.:...|....||.         |:..|        :.||.       
 Worm   193 TNAM------RRDLMDRWGIRASTFYDRPPTWKFRDTTIQEIHDLYLRLSQKERILQGKDEDSTI 251

  Fly   275 -TEKGDE----------FIILSVGQFRPEKDHPLQLQAIYELRTLLAQDEAL-WNQIKLVIVGSC 327
             |.|...          .:.||...:.|::...:.|.|      |:|.|:.: ..::.::|.|..
 Worm   252 LTHKSSNGVVQLLTTRPIVFLSSTSWTPDERFEILLDA------LVAYDKTIGLPRVLMIITGKG 310

  Fly   328 RNEDDY------ERLKNMQDLTKHLSLENNVQFSVNVPYEDLLKLYQTAHIGI--HTMWN----- 379
            ..:..|      :.|||:..||..|..            ||..|:..:|.:||  ||..:     
 Worm   311 PLKAKYLQEIHEKNLKNVDVLTPWLEA------------EDYPKILASADLGISLHTSTSGLDLP 363

  Fly   380 ----EHFGIGIVESMAAGL----IMVAHKSGGPLLD--------IVETSAGSQNGFLATDAVEYA 428
                :.|| ..|.::|...    .:|..|:.|.|.|        |:|.|.|..|.  ..:.:...
 Worm   364 MKVVDMFG-AKVPALALKFKCIDELVEEKTNGYLFDDSEQLSRQIIELSRGFPNN--CNELIRLK 425

  Fly   429 ENILNIIVNNSEMNGIRNAARASVERFSEQEFEKNFLRAV 468
            :|......::.|:...|:|...:..|..:..|.|  |||:
 Worm   426 KNTQEQKFDSWEVMWKRSATSGADFRVPDNGFAK--LRAI 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg11NP_001262182.1 PLN02949 24..473 CDD:215511 98/495 (20%)
GT1_ALG11_like 44..463 CDD:99978 94/488 (19%)
algn-1NP_498420.2 GT1_ALG1_like 11..447 CDD:99986 92/475 (19%)
PLN02275 12..410 CDD:215155 84/436 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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