DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alg11 and algn-2

DIOPT Version :9

Sequence 1:NP_001262182.1 Gene:Alg11 / 40402 FlyBaseID:FBgn0037108 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_495010.2 Gene:algn-2 / 173912 WormBaseID:WBGene00017282 Length:400 Species:Caenorhabditis elegans


Alignment Length:450 Identity:104/450 - (23%)
Similarity:185/450 - (41%) Gaps:112/450 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 INVGIFHPYCNAG-GGGERVLWCAVRALQEKYQNARMVIYTGDIDASPNSILQKAKNVFNIAVDS 107
            :.|.|.||  :.| ||.||::..|...||::..:.|  |:|.....|         :.|...:|.
 Worm     2 VRVTILHP--DLGIGGAERLIVDAAVGLQDRGHSVR--IFTNQYSRS---------HCFQETLDL 53

  Fly   108 DNVKFVFLKQRHWIEAKNYPHFTLLGQSIGSMVVGLEALCRF---------------PPDIYIDT 157
            |....|     .||..      ::.|:.        .|||.:               ..|:.:..
 Worm    54 DICTVV-----PWIPR------SIFGKG--------HALCAYLKMIIAALYIVIYHKDTDVILSD 99

  Fly   158 MGYAFTYPLFRYLAQSKVGCYVHYPVISTDML--KRVQQRQMSHNNKKYVARNPFLTWTKLAYYR 220
            ...|..:.| |:.:::|:..|.|:|    |.|  ||       ..|.|...|| .:.|.:     
 Worm   100 SVSASQFVL-RHFSKAKLVFYCHFP----DRLLTKR-------DGNLKAFYRN-IIDWIE----- 146

  Fly   221 LFSRMYKWVGCCAETIMVNSSWTENHILQLWDVPFKTHR------VYPPCEVSHLKSLQHTE--- 276
                  ::....|:.|.|||::|:|.:.:    .||:..      :||........|::.::   
 Worm   147 ------EYTTGLADVICVNSNFTKNVVRE----TFKSLASQELTVLYPSLNTEFFDSIEASDDFG 201

  Fly   277 ----KGDEFIILSVGQFRPEKDHPLQLQAIYELRTLLAQDEALWNQIKLVIVG--SCRNEDDYER 335
                :|.:::..|:.:|..:|:..|.|.|..:|::.|..||  ::|..|||.|  ..:|.::.|.
 Worm   202 EEIPRGTKYVFTSLNRFERKKNIVLALDAFEKLKSNLPADE--FSQCHLVIAGGYDLKNPENIEH 264

  Fly   336 LKNMQDLTKHLSLENNVQFSVNVPYE-DLLKLYQTAHIGIHTMWNEHFGIGIVESMAAGLIMVAH 399
            ...:.:..|.|.|..:....::.|.: ..:.|.:.:...::|...|||||..||:|..|..::|.
 Worm   265 YDELVEHMKKLELPADQIVFLHSPSDTQKVNLIRRSRAVLYTPDREHFGIVPVEAMYLGTPVIAV 329

  Fly   400 KSGGPLLDIVETSAGSQNGFLATDAVE-YAENILNIIVNNSEMNGIRNAARASVERFSEQ 458
            .:|||    .|:...::.|||.....| :||.::: ::.:.||          ..|.||:
 Worm   330 NTGGP----CESVRNNETGFLVDQTAEAFAEKMID-LMKDEEM----------YRRMSEE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg11NP_001262182.1 PLN02949 24..473 CDD:215511 104/449 (23%)
GT1_ALG11_like 44..463 CDD:99978 104/449 (23%)
algn-2NP_495010.2 RfaB 1..400 CDD:223515 104/449 (23%)
GT1_ALG2_like 2..392 CDD:99977 104/449 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.