DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7166 and lrit3a

DIOPT Version :9

Sequence 1:NP_001262181.1 Gene:CG7166 / 40401 FlyBaseID:FBgn0037107 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001122166.1 Gene:lrit3a / 558559 ZFINID:ZDB-GENE-080723-63 Length:636 Species:Danio rerio


Alignment Length:113 Identity:35/113 - (30%)
Similarity:50/113 - (44%) Gaps:17/113 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 VPPTLRALPHNGQVTARKGSTVTLECKASGNPVPTIFWFKKD--------VFSGPTHLSDSSTLI 189
            |.||:  :....::|:..||.|.|.|.|:|.|.||:.|...|        |...|......|.|.
Zfish   250 VKPTV--MTSATKITSPLGSNVLLRCDANGFPTPTLLWTTADGSVVNNTVVQESPGEGVRWSILS 312

  Fly   190 LENVDRHHAGTYQCSADNGVKD-----RVSMD-IQLTILSPPEITVEK 231
            |.::....||.|:|.|.|...:     .:|:| :|.|...|| |.:.|
Zfish   313 LHSIVFKDAGDYRCKAKNVAGNAEAYITLSVDGVQPTTPFPP-INITK 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7166NP_001262181.1 IG_like 50..133 CDD:214653 35/113 (31%)
Ig 56..116 CDD:143165
IG_like 144..221 CDD:214653 27/90 (30%)
IGc2 151..209 CDD:197706 23/65 (35%)
IG_like 232..313 CDD:214653 35/113 (31%)
Ig 242..311 CDD:143165
lrit3aNP_001122166.1 LRR_8 81..141 CDD:290566
leucine-rich repeat 83..106 CDD:275378
LRR_4 107..145 CDD:289563
leucine-rich repeat 107..130 CDD:275378
LRR_8 129..>171 CDD:290566
LRR_4 129..170 CDD:289563
leucine-rich repeat 131..154 CDD:275378
leucine-rich repeat 155..168 CDD:275378
TPKR_C2 199..249 CDD:301599
Ig 252..343 CDD:299845 26/92 (28%)
IG_like 261..343 CDD:214653 24/81 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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