DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7166 and lrit1a

DIOPT Version :9

Sequence 1:NP_001262181.1 Gene:CG7166 / 40401 FlyBaseID:FBgn0037107 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001018174.2 Gene:lrit1a / 553943 ZFINID:ZDB-GENE-040924-5 Length:643 Species:Danio rerio


Alignment Length:178 Identity:45/178 - (25%)
Similarity:66/178 - (37%) Gaps:43/178 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 CKVQNLGSFVLLWRKGSSVLTAGHLKITRDQRFKIVGDYNLQINGVKTQDAGDYICQLGDQENRD 124
            |::.:|..|    :|..|:..|     ..|.|.:.....:|  :||...||....||      ..
Zfish   205 CRLYDLVQF----QKSPSLSVA-----FIDTRLRCADPESL--SGVLFSDAELRRCQ------GP 252

  Fly   125 QVHTVEILVPPTLRALPHNGQVTARKGSTVTLECKASGNPVPTIFWFKKD--VFSGPTHLSDS-- 185
            :|||..             .:|.:..|:.|.|.|...|.|:|.:.|.:.|  ..:|...|.:|  
Zfish   253 RVHTAV-------------ARVRSAVGNNVLLRCGTVGVPIPELAWRRADGKPLNGTVLLENSKE 304

  Fly   186 ----STLILENVDRHHAGTYQCSADN--GVKDRVSMDIQLTILSPPEI 227
                |.|.:..|.....|.|.|.|.|  |..:.|   |.|.|...|::
Zfish   305 GIVWSILSVPAVSYRDTGKYICKATNYAGSAEAV---ISLIINDAPKM 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7166NP_001262181.1 IG_like 50..133 CDD:214653 18/72 (25%)
Ig 56..116 CDD:143165 13/55 (24%)
IG_like 144..221 CDD:214653 25/86 (29%)
IGc2 151..209 CDD:197706 20/67 (30%)
IG_like 232..313 CDD:214653
Ig 242..311 CDD:143165
lrit1aNP_001018174.2 leucine-rich repeat 61..84 CDD:275378
LRR_8 63..119 CDD:290566
LRR_RI <77..175 CDD:238064
leucine-rich repeat 85..108 CDD:275378
LRR_8 108..167 CDD:290566
leucine-rich repeat 109..132 CDD:275378
leucine-rich repeat 133..156 CDD:275378
leucine-rich repeat 157..170 CDD:275378
LRRCT 199..243 CDD:214507 11/48 (23%)
I-set 252..343 CDD:254352 28/106 (26%)
Ig 259..333 CDD:299845 21/73 (29%)
fn3 448..515 CDD:278470
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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