DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7166 and dscamb

DIOPT Version :9

Sequence 1:NP_001262181.1 Gene:CG7166 / 40401 FlyBaseID:FBgn0037107 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_009289749.1 Gene:dscamb / 386937 ZFINID:ZDB-GENE-031118-67 Length:2020 Species:Danio rerio


Alignment Length:580 Identity:117/580 - (20%)
Similarity:188/580 - (32%) Gaps:231/580 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 IVGETIELPCKVQNLGSFVLLWRKGSSVLTAGHLKITRDQRFKIVGDYNLQINGVKTQDAGDYIC 115
            |.|....:.|::.....:.:.|.|.|::|...|    |.:.|:..|  .|:::.|:..|.|:|.|
Zfish   516 IAGRDTYIHCRIIGYPYYSIKWYKDSNLLPFNH----RQRAFENNG--TLKLSNVQNSDEGEYTC 574

  Fly   116 Q-LGDQENRDQVHT---VEILVPPTLR----------------------ALP------------- 141
            . |.|.|.  |:|.   |.:.|||.::                      .||             
Zfish   575 YVLVDPEK--QIHRSVHVTVKVPPLIQHSDSQSASIGQRVFIPCVVISGDLPMSITWHKDGRPIN 637

  Fly   142 ------------------------HNGQVT--ARK------------------------------ 150
                                    |||..|  ||.                              
Zfish   638 ASLGVTIDNIDFTSSLRISNLSEIHNGSYTCIARNEAAAVEHSIQLIVKVPPHFEVQPKDQDGIY 702

  Fly   151 GSTVTLECKASGNPVPTIFWFKKDVFSGP------------THLSDSSTLILENVDRHHAGTYQC 203
            |.:|||.|.|.|||:|||.|........|            ..|.::.:|::::|....||.|.|
Zfish   703 GKSVTLNCSAKGNPIPTIVWNHSKGAGVPQFQPIALNSGSRVQLLENGSLLIKHVLEEDAGFYLC 767

  Fly   204 SADNGVKDRVSMDIQLTILSPPEITVEKSWVHASEGYDVELVCIVHGDVNSEMLWYQNSFLLDAT 268
            ...|.|...:|..:.||:..|..||...:...|.:|:..|:.|..||:...::.|.:.|.:::  
Zfish   768 KVSNDVGADISKSMYLTVKIPAMITSYPNTTRAEQGHMTEMSCTAHGEKPIKVRWEKESHIIN-- 830

  Fly   269 DRRSMYPRDDRY-------------SLIIRNFQPTDFGNYSCVADNALGRTKKYIE--VSGRPGP 318
                  |...||             :|.|.:....|.|.:||:|.|:.|..|..|:  |..||.|
Zfish   831 ------PDMSRYVVTVKEVGDEVISTLQILHTVREDSGFFSCIAINSYGEDKGIIQLIVQDRPDP 889

  Fly   319 A--------------------DFISPALSGFLDHY---NLTW-----TIESIPPLDEIKLL---- 351
            .                    |..|| ::|:..:|   :.:|     |.:..|.|::..::    
Zfish   890 PEVEIREVKDRTIALRWTMGFDGNSP-ITGYDINYKNKSASWASSQMTKDVSPQLNQATIIELHP 953

  Fly   352 -----YRRLLMNE--------------------------------------TYQHPGK------- 366
                 .|....|:                                      |::.|.|       
Zfish   954 ASTYNIRMFAKNQIGESRPSNELTITTDEAPPDGAPQDVQLEAISSQGIKVTWKPPHKHLQNGLI 1018

  Fly   367 ------WHEYHIKPTP----IRTDGSHFLMSYLVKNLEHNAVYEAIVQAKNKYGWNEISD 416
                  :.|:....:|    |..|.:..:.:..:.||:....||..|||.|:.|....|:
Zfish  1019 RSYQVCYREFGTGGSPQYNTINVDTTGDIETLTLDNLKKYTQYEVRVQAANRAGMGPTSE 1078

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7166NP_001262181.1 IG_like 50..133 CDD:214653 23/85 (27%)
Ig 56..116 CDD:143165 14/59 (24%)
IG_like 144..221 CDD:214653 29/120 (24%)
IGc2 151..209 CDD:197706 22/69 (32%)
IG_like 232..313 CDD:214653 22/95 (23%)
Ig 242..311 CDD:143165 19/81 (23%)
dscambXP_009289749.1 I-set 132..198 CDD:254352
I-set 225..310 CDD:254352
IGc2 239..300 CDD:197706
IG_like 320..400 CDD:214653
IGc2 328..391 CDD:197706
IG_like 417..501 CDD:214653
Ig 424..498 CDD:143165
IG_like 511..592 CDD:214653 23/83 (28%)
IGc2 518..576 CDD:197706 16/63 (25%)
I-set 595..685 CDD:254352 10/89 (11%)
Ig 612..682 CDD:143165 8/69 (12%)
I-set 689..785 CDD:254352 25/95 (26%)
Ig7_DSCAM 706..785 CDD:143211 24/78 (31%)
IG_like 795..883 CDD:214653 22/95 (23%)
Ig 803..890 CDD:299845 24/94 (26%)
FN3 887..980 CDD:238020 13/93 (14%)
FN3 987..1084 CDD:238020 17/92 (18%)
FN3 1092..1185 CDD:238020
FN3 1190..1279 CDD:238020
IGc2 1302..1367 CDD:197706
FN3 1398..1471 CDD:238020
FN3 1485..1557 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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