DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7166 and ncam1a

DIOPT Version :9

Sequence 1:NP_001262181.1 Gene:CG7166 / 40401 FlyBaseID:FBgn0037107 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_009293555.1 Gene:ncam1a / 30447 ZFINID:ZDB-GENE-990415-31 Length:1010 Species:Danio rerio


Alignment Length:523 Identity:113/523 - (21%)
Similarity:189/523 - (36%) Gaps:154/523 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GETIELPCKVQNLGSFVLLWRKGSSVLTAGHLKITRDQRFKIVGDYNLQINGVKTQDAGDYICQ- 116
            |:..::.|.|.:.....::||....     .::...|.|.|::.:.:|||.|:|..|.|||.|: 
Zfish   129 GDDADIICDVISSPPPTIIWRYKKM-----RIQPETDVRLKVLSNNHLQIRGIKKTDEGDYTCEG 188

  Fly   117 ----LGDQENRDQVHTVEILVPPTLRALPHNGQVTARKGSTVTLECKASGNPVPTIFWFKKDVFS 177
                .|:.:.|  |..|.:.|.|::|........||.....|||.|.|.|.|.||:.|.:     
Zfish   189 RIMARGEIDLR--V
IKVIVNVLPSIRTRYTELNATADINQAVTLACHADGYPEPTVKWAR----- 246

  Fly   178 GPTHL---------SDSSTLILENVDRHHAGTYQCSADNGVKDRVSMDIQLTILSPPEITVEKSW 233
            |.|.|         .|.|.|.:::|::...|.|:|.|.|...:| |.::.|.:...|:||..::.
Zfish   247 GNTELESDEKYSLNEDGSELTIKDVNKLDEGDYKCIARNKAGER-SEEVTLNVFVQPKITFLENQ 310

  Fly   234 VHASEGYDVELVCIVHGDVNSEMLWYQNSFLLDATDRRSMYPRDDRY----------------SL 282
            ..:.....:.|.|...||....::|.....:....::.| :.|.:::                ||
Zfish   311 TASELEEQITLTCEATGDPTPNIIWSFGRRVFTENEQAS-WTRPEKHKSLDGNVVVRSDARVSSL 374

  Fly   283 IIRNFQPTDFGNYSCVADNALGR--TKKYIEVSGRP-------------GPADFISPALS----- 327
            .::..|.||.|.|.|.|.|::|:  ...|:||...|             .||:....||:     
Zfish   375 TLKYVQFTDAGQYLCTARNSIGQDIQSMYLEVRYAPKIQGPQAVFTWEGNPANITCEALAHPGAS 439

  Fly   328 --------------------------GFLD----------HYNLTWT----------------IE 340
                                      .||:          .||.|.|                :.
Zfish   440 VLWFRDGQQLPSANTTNVKIYNTPTVSFLEVTPDSQNDFGSYNCTATNVIGTESKEFILVQADVP 504

  Fly   341 SIPPLDEIKLLYRRLLMNETYQHP------------GKW---------HEYHIKPTPIRTDGSHF 384
            |.|.::.:: .|....|.| ::.|            .:|         .||.::      ||.:.
Zfish   505 SAPSIERVE-PYSSTAMIE-FEEPASSGGVPVLKYKAEWRIAGQDWTDREYELE------DGLNL 561

  Fly   385 LMSYLVKNLEHNAVYEAIVQAKNKYGWNEISDIHQFYTRNHDLLLDIDMEYKMGISSNIRISPTV 449
            :   .:..|:....||..:.|.|..|..|.|....|.|:      .:.:.::|...:...|.||.
Zfish   562 I---TIVGLKPETTYEVKISAINGKGEGESSAPESFKTQ------PVRLPFRMSPETPTSIPPTT 617

  Fly   450 SGI 452
            :.|
Zfish   618 ADI 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7166NP_001262181.1 IG_like 50..133 CDD:214653 22/84 (26%)
Ig 56..116 CDD:143165 16/59 (27%)
IG_like 144..221 CDD:214653 27/85 (32%)
IGc2 151..209 CDD:197706 22/66 (33%)
IG_like 232..313 CDD:214653 20/98 (20%)
Ig 242..311 CDD:143165 19/86 (22%)
ncam1aXP_009293555.1 Ig 20..112 CDD:299845
I-set 21..111 CDD:254352
IG_like 121..200 CDD:214653 20/77 (26%)
IGc2 128..189 CDD:197706 18/64 (28%)
Ig 208..301 CDD:299845 29/98 (30%)
IG_like 219..298 CDD:214653 27/84 (32%)
Ig 300..406 CDD:299845 22/106 (21%)
IG_like 308..406 CDD:214653 19/98 (19%)
ig 413..498 CDD:278476 10/84 (12%)
IG_like 415..498 CDD:214653 10/82 (12%)
fn3 505..589 CDD:278470 18/94 (19%)
FN3 624..715 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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