DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7166 and Lsamp

DIOPT Version :9

Sequence 1:NP_001262181.1 Gene:CG7166 / 40401 FlyBaseID:FBgn0037107 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_030104997.1 Gene:Lsamp / 268890 MGIID:1261760 Length:392 Species:Mus musculus


Alignment Length:343 Identity:94/343 - (27%)
Similarity:143/343 - (41%) Gaps:56/343 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RKYWTLVLYLFSFSLSLIGGSFILPENDPPT-------TAPKF--------------------LS 43
            |.||...:::..|.|||.....:...|.||.       |.|..                    .:
Mouse     2 RTYWLHSVWVLGFFLSLFSLQVLAFWNQPPAEVNLSPITIPGTEETMRKKAKEEEGLPVRSVDFN 66

  Fly    44 RG-HLYKVIVGETIELPCKVQNLGSFVLLWRKGSSVLTAGHLKITRDQRFKI----VGDYNLQIN 103
            || ....|..|:|..|.|.|::..|.| .|...|.::.|||.|.:.|.|.::    ..:|:|:|.
Mouse    67 RGTDNITVRQGDTAILRCVVEDKNSKV-AWLNRSGIIFAGHDKWSLDPRVELEKRHALEYSLRIQ 130

  Fly   104 GVKTQDAGDYICQLGDQE--NRDQVHTVEILVPPTLRALPHNGQVTARKGSTVTLECKASGNPVP 166
            .|...|.|.|.|.:..|.  ...||:.: :.|||.:..:  :..||..:||.|||.|.|:|.|.|
Mouse   131 KVDVYDEGSYTCSVQTQHEPKTSQVYLI-VQVPPKISNI--SSDVTVNEGSNVTLVCMANGRPEP 192

  Fly   167 TIFWFKKDVFSGPTHLS--------DSSTLILENVDRHHAGTYQCSADNGVKDRVSMDIQLTILS 223
            .|.|         .||:        :...|.:..:.|..:|.|:|.|.|.|.......:::|:..
Mouse   193 VITW---------RHLTPLGREFEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNY 248

  Fly   224 PPEITVEKSWVHASEGYDVELVCIVHGDVNSEMLWYQNSFLLDATDRRSMYPRDDRYSLIIRNFQ 288
            ||.||..|| ..|:.|....|.|........:..||::...:::.:...:...:.:.||.:.|..
Mouse   249 PPTITESKS-NEATTGRQASLKCEASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVT 312

  Fly   289 PTDFGNYSCVADNALGRT 306
            ...:|||:|||.|.||.|
Mouse   313 EEHYGNYTCVAANKLGVT 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7166NP_001262181.1 IG_like 50..133 CDD:214653 27/88 (31%)
Ig 56..116 CDD:143165 20/63 (32%)
IG_like 144..221 CDD:214653 24/84 (29%)
IGc2 151..209 CDD:197706 21/65 (32%)
IG_like 232..313 CDD:214653 20/75 (27%)
Ig 242..311 CDD:143165 17/65 (26%)
LsampXP_030104997.1 Ig 69..159 CDD:386229 27/91 (30%)
Ig_3 163..232 CDD:372822 23/79 (29%)
Ig_3 250..325 CDD:372822 20/75 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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