DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7166 and rig-3

DIOPT Version :9

Sequence 1:NP_001262181.1 Gene:CG7166 / 40401 FlyBaseID:FBgn0037107 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_509155.1 Gene:rig-3 / 180958 WormBaseID:WBGene00004370 Length:487 Species:Caenorhabditis elegans


Alignment Length:439 Identity:92/439 - (20%)
Similarity:162/439 - (36%) Gaps:120/439 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VLLWRKGSSVLTAGHLKITRDQRFKIVGDYNLQINGVKTQDAGDYIC--QLGDQENRDQVHTVEI 131
            |:|..|||.     |.|.            :|..:.|.|:|.|.|.|  :....||.::  |:::
 Worm    95 VILNEKGSK-----HRKT------------SLHFSSVHTRDTGLYTCTGRTAGGENFEK--TIKL 140

  Fly   132 LVPPTLRALPHNGQVT---ARKGSTVTLEC---------------KASGNPVPTIFWFKKDVFSG 178
            :|.|   |:..|.:.|   |..|..:|::|               ..:|.|:....|        
 Worm   141 VV
LP---AIEWNDKDTVKGALLGEPITIDCGVKGPSGKEPMIQMTNGNGEPLDEEIW-------- 194

  Fly   179 PTHLSDSSTLILENVDRHHAG-TYQC----------SADNGVKDRVSMDIQLTILSPPEITVEKS 232
             |...:.:|  ::::.:.||. |..|          ..:..|.||  .|:.:.:.:.||...|:|
 Worm   195 -TIAGNEAT--IDSLKKEHAELTVSCITIEMHQETSKEEFPVVDR--KDVNIEVYTLPEFETEES 254

  Fly   233 ---WVHASEGYDVELVCIV-------------HGDVNSEMLWYQNSFLLDATDRRSMYPRDDRYS 281
               .|..:...|..:.|.|             |||...:|....|.|:.....:.:        .
 Worm   255 VQYTVIDNHVRDAIIYCNVTHSFPPVRHYTFYHGDEEIKMSDKFNIFVNVGVSQGA--------H 311

  Fly   282 LIIRNFQPTDFGNYSCVADNALGRTKKYIEVSGRPGPADFISPALSGFLD-HYNLTWTIESIP-- 343
            |.|.|....|.|.|.|.|:|...::...|.:.....||:   |.::...| .:::.|.:|||.  
 Worm   312 LKIHNVNENDLGTYKCEANNIKAKSYHTIHLREANAPAE---PKVTLIEDKRHSIIWKVESIDRD 373

  Fly   344 ---PLDEIKLLYRRLLMNETYQHPG---------KWHEYHI-KPTPIRTDGSHFLMSYLVKNLEH 395
               |:..:::   |.|...|.:..|         .|..:.| ....|:.||     .|.:..|.|
 Worm   374 PDLPMTAVEI---RHLRAGTAEASGVSDEDISDAYWKSHSIFMQRNIKDDG-----IYEINGLRH 430

  Fly   396 NAVYEAIVQAKNKYGWNEISDIHQFYTRNHDL-LLD--IDMEYKMGISS 441
            ...|....:..|:.|:.:...:......:||| ::|  .|.::.:.:::
 Worm   431 GHEYVWRFRQINEAGFGDSVVLRAKTLDDHDLEMMDSASDSKFPLALAT 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7166NP_001262181.1 IG_like 50..133 CDD:214653 17/65 (26%)
Ig 56..116 CDD:143165 14/48 (29%)
IG_like 144..221 CDD:214653 18/105 (17%)
IGc2 151..209 CDD:197706 12/83 (14%)
IG_like 232..313 CDD:214653 21/96 (22%)
Ig 242..311 CDD:143165 17/81 (21%)
rig-3NP_509155.1 IG_like 48..142 CDD:214653 17/65 (26%)
Ig 267..341 CDD:319273 17/81 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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