DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7166 and rig-5

DIOPT Version :9

Sequence 1:NP_001262181.1 Gene:CG7166 / 40401 FlyBaseID:FBgn0037107 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001251131.1 Gene:rig-5 / 172791 WormBaseID:WBGene00004372 Length:482 Species:Caenorhabditis elegans


Alignment Length:328 Identity:91/328 - (27%)
Similarity:145/328 - (44%) Gaps:52/328 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LYLFSFSLSLIGGSFIL-----PENDPPTTAPKFLSRGHLYKVIVGETIELPCKVQNLGSFVLLW 72
            :|||    :|:.|..::     ....|||.....:|..   ..::|:.::..|.|.:|||.::.:
 Worm    61 MYLF----ALLCGVLLVFKQACSRGAPPTIQQPSMSSA---VALLGQDVDFTCIVNDLGSHMVAF 118

  Fly    73 RKGSS---VLTAGHLKITRDQRFKI---VGDYN----LQINGVKTQDAGDYICQLGDQENRDQVH 127
            .|..|   :|:.......|..::::   :||.:    |.|..|:..|.|:|.||:..:.......
 Worm   119 VKADSPPRLLSFDEKVFRRRNKYELKPRIGDLHNEWVLTIKNVQESDRGNYSCQINTEPITLSTG 183

  Fly   128 TVEILVPPTL-RALPHNGQVTARKGSTVTLECKASGNPVPTIFWFKKD---------------VF 176
            .:::.|||.: |:.|  ..|..|:|:.|:|.|||.|||.||:.|.::|               ||
 Worm   184 ELDVKVPPVVSRSTP--AAVEVREGNNVSLTCKADGNPTPTVIWRRQDRQIIRYNGATGFGASVF 246

  Fly   177 SGPTHLSDSSTLILENVDRHHAGTYQCSADNGVKDRVSMDIQLTILSPPEITVEKSWVHASEGYD 241
            .||       .|.|..|.|.|...|.|.|.||:....|..::|.:..||.:..:...|.||.|..
 Worm   247 HGP-------VLHLTKVSRKHMSEYLCVASNGIPPDESWTVKLLVTFPPLVQAQSETVQASVGSM 304

  Fly   242 VELVCIVHGDVNSEMLWYQNSFLLDATDRRSM-YPRDDRYS----LIIRNFQPTDFGNYSCVADN 301
            ..:||........||.|.::...:..::..:| :....:|.    |.|||.|.:.||.|.|||.|
 Worm   305 ARMVCTTEAWPRPEMGWEKDGEPVYESNNVAMTHTVSGQYHSVHILEIRNVQSSHFGVYRCVAKN 369

  Fly   302 ALG 304
            ..|
 Worm   370 DNG 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7166NP_001262181.1 IG_like 50..133 CDD:214653 20/92 (22%)
Ig 56..116 CDD:143165 17/69 (25%)
IG_like 144..221 CDD:214653 31/91 (34%)
IGc2 151..209 CDD:197706 26/72 (36%)
IG_like 232..313 CDD:214653 24/78 (31%)
Ig 242..311 CDD:143165 20/68 (29%)
rig-5NP_001251131.1 IG_like 92..189 CDD:214653 21/99 (21%)
Ig_3 191..270 CDD:372822 30/87 (34%)
IG 294..380 CDD:214652 24/79 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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