DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7166 and lsamp

DIOPT Version :10

Sequence 1:NP_649339.2 Gene:CG7166 / 40401 FlyBaseID:FBgn0037107 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_031751462.1 Gene:lsamp / 100124984 XenbaseID:XB-GENE-5759171 Length:368 Species:Xenopus tropicalis


Alignment Length:359 Identity:94/359 - (26%)
Similarity:147/359 - (40%) Gaps:62/359 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GETIELPCKVQNLGSFVLLWRKGSSVLTAGHLKITRDQRFKI----VGDYNLQINGVKTQDAGDY 113
            |:|..|.|.|::..|.| .|...|.::.||..|.:.|.|.::    :.:|:|:|..|...|.|.|
 Frog    46 GDTAILRCFVEDRSSRV-AWLNRSGIIFAGDDKWSLDPRVELEKRSLLEYSLRIQKVDVSDEGPY 109

  Fly   114 ICQLGDQEN--RDQVHTVEILVPPTLRALPHNGQVTARKGSTVTLECKASGNPVPTIFWFKKDVF 176
            .|.:..:::  ..||:.: :.|||.:..:  :..:|..:||.|||.|.|.|.|.|.|.|......
 Frog   110 TCSVQTKQHTKTTQVYLI-VQVPPKISNI--SADITVNEGSNVTLMCIAYGRPEPMITWRHLTPT 171

  Fly   177 SGPTHLSD----SSTLILENVDRHHAGTYQCSADNGVKDRVSMDIQLTILSPPEITVEKSWVHAS 237
            :|.:...|    ...|.::.:.|..:|.|:|.|.|.|.......:::|:..||.||..|| ..|:
 Frog   172 AGTSPARDFEGEEEFLEIQGITREQSGRYECKAANEVASADVKQVRVTVNYPPIITESKS-NEAT 235

  Fly   238 EGYDVELVCIVHGDVNSEMLWYQNSFLLDATDRR-------SMYPRDDRYSLIIRNFQPTDFGNY 295
            .|....|.|........:..||::    |...||       .:.....|..|::.|.....:|||
 Frog   236 TGKQAILRCEASAVPAPDFEWYKD----DTRSRRINSAQGLEIRNTGSRSVLMVANVTEEHYGNY 296

  Fly   296 SCVADNALGRTKKYIEVSGRPGPADFISPALSGFLDHYNLTWTIESIPPLDEIKLLYRRLLMNET 360
            :|||.|.||.|...:.:..|..|...:|.:..|...||                           
 Frog   297 TCVAANKLGITNTSLYLYKRVSPTKPMSASERGSNVHY--------------------------- 334

  Fly   361 YQHPGKWHEYHIKP-TPIRTDGSHFLMSYLVKNL 393
                    :|.:.| |||.:..|.....:|:.||
 Frog   335 --------QYKVGPGTPIDSATSLAASLWLMANL 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7166NP_649339.2 IG_like 50..133 CDD:214653 24/85 (28%)
Ig strand B 56..60 CDD:409353 1/3 (33%)
Ig strand C 69..73 CDD:409353 1/3 (33%)
Ig strand E 98..102 CDD:409353 2/3 (67%)
Ig strand F 112..116 CDD:409353 1/3 (33%)
Ig_3 134..207 CDD:464046 23/76 (30%)
Ig_3 224..301 CDD:464046 24/83 (29%)
lsampXP_031751462.1 Ig 38..128 CDD:472250 24/83 (29%)
Ig strand B 49..53 CDD:409353 1/3 (33%)
Ig strand C 61..65 CDD:409353 1/4 (25%)
Ig strand E 94..98 CDD:409353 2/3 (67%)
Ig strand F 108..113 CDD:409353 2/4 (50%)
Ig strand G 121..124 CDD:409353 0/2 (0%)
Ig_3 131..206 CDD:464046 23/76 (30%)
Ig_3 223..302 CDD:464046 24/83 (29%)

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