Sequence 1: | NP_002327.2 | Gene: | LRP6 / 4040 | HGNCID: | 6698 | Length: | 1613 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097934.2 | Gene: | LpR1 / 2768687 | FlyBaseID: | FBgn0066101 | Length: | 1076 | Species: | Drosophila melanogaster |
Alignment Length: | 419 | Identity: | 160/419 - (38%) |
---|---|---|---|
Similarity: | 226/419 - (53%) | Gaps: | 40/419 - (9%) |
- Green bases have known domain annotations that are detailed below.
Human 23 LLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ 87
Human 88 NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFM 152
Human 153 YWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ 217
Human 218 AVVKGS--LPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREI---HSDIFSPMDIHAFSQQ 277
Human 278 RQPNATNPCGIDNGGCSHLCLMSP----VKPFYQCACPTGVKLLENGKTCKDGATELLLL----- 333
Human 334 ARRTDLR----RISLDT---PDFTDIVLQLED----------IRHAIAIDYDPVEGYIYWTDDEV 381
Human 382 RAIRRSFIDGSGSQFVVTAQIAHPDGIAV 410 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP6 | NP_002327.2 | Beta-propeller 1 | 20..275 | 111/256 (43%) | |
NHL | 55..272 | CDD:302697 | 99/221 (45%) | ||
NHL repeat | 55..93 | CDD:271320 | 13/37 (35%) | ||
LY | 89..127 | CDD:214531 | 13/37 (35%) | ||
NHL repeat | 97..132 | CDD:271320 | 15/34 (44%) | ||
NHL repeat | 140..176 | CDD:271320 | 25/35 (71%) | ||
Ldl_recept_b | 150..190 | CDD:278487 | 25/39 (64%) | ||
LY | 175..216 | CDD:214531 | 19/40 (48%) | ||
NHL repeat | 181..217 | CDD:271320 | 17/35 (49%) | ||
NHL repeat | 226..253 | CDD:271320 | 13/26 (50%) | ||
LDL-receptor class B 5 | 237..276 | 14/41 (34%) | |||
FXa_inhibition | 286..323 | CDD:291342 | 20/40 (50%) | ||
Beta-propeller 2 | 328..589 | 24/105 (23%) | |||
LY | 353..393 | CDD:214531 | 7/49 (14%) | ||
LY | 397..437 | CDD:214531 | 5/14 (36%) | ||
LY | 438..481 | CDD:214531 | |||
LY | 483..524 | CDD:214531 | |||
LY | 525..558 | CDD:214531 | |||
FXa_inhibition | 592..627 | CDD:291342 | |||
Beta-propeller 3 | 631..890 | ||||
LY | 656..694 | CDD:214531 | |||
LY | 697..739 | CDD:214531 | |||
LY | 740..783 | CDD:214531 | |||
LY | 783..825 | CDD:214531 | |||
LY | 827..866 | CDD:214531 | |||
FXa_inhibition | 893..929 | CDD:291342 | |||
Beta-propeller 4 | 933..1202 | ||||
LY | 958..998 | CDD:214531 | |||
Ldl_recept_b | 1069..1110 | CDD:278487 | |||
LY | 1094..1136 | CDD:214531 | |||
FXa_inhibition | 1207..1243 | CDD:291342 | |||
LDLa | 1249..1285 | CDD:238060 | |||
LDLa | 1288..1322 | CDD:238060 | |||
LDLa | 1326..1360 | CDD:238060 | |||
PPPSP motif A | 1487..1493 | ||||
PPPSP motif B | 1527..1534 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1556..1613 | ||||
PPPSP motif C | 1568..1575 | ||||
PPPSP motif D | 1588..1593 | ||||
PPPSP motif E | 1603..1610 | ||||
LpR1 | NP_001097934.2 | LDLa | 135..167 | CDD:197566 | |
LDLa | 178..210 | CDD:197566 | |||
LDLa | 219..254 | CDD:238060 | |||
LDLa | 259..295 | CDD:238060 | |||
LDLa | 343..373 | CDD:238060 | |||
LDLa | 383..415 | CDD:197566 | |||
Ldl_recept_a | 423..459 | CDD:278486 | |||
LDLa | 476..504 | CDD:197566 | |||
FXa_inhibition | 514..549 | CDD:291342 | |||
EGF_CA | 551..581 | CDD:214542 | |||
LY | 662..702 | CDD:214531 | 14/39 (36%) | ||
LY | 704..747 | CDD:214531 | 29/42 (69%) | ||
LY | 749..790 | CDD:214531 | 19/40 (48%) | ||
FXa_inhibition | 864..905 | CDD:291342 | 20/40 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |