DRSC/TRiP Functional Genomics Resources

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Protein Alignment S1P and Pcsk2

DIOPT Version :10

Sequence 1:NP_649337.2 Gene:S1P / 40399 FlyBaseID:FBgn0037105 Length:1012 Species:Drosophila melanogaster
Sequence 2:NP_036878.1 Gene:Pcsk2 / 25121 RGDID:3273 Length:637 Species:Rattus norvegicus


Alignment Length:583 Identity:123/583 - (21%)
Similarity:199/583 - (34%) Gaps:182/583 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 RLQTHPSVKAVVPQ----------RSVRRI---LNYDAYSNLTYIHRHPQGVLRNRNPNNDRHRQ 143
            :|:..|.:|..:.|          |.:..|   :|...::...|:....|.   :..|..|    
  Rat    87 QLERDPRIKMALQQEGFDRKKRGYRDINEIDINMNDPLFTKQWYLFNTGQA---DGTPGLD---- 144

  Fly   144 LCSVLHANILWKLGITGKGVKVAIFDTGLTKNHPHFRNVKERTNWTNEKSLDDRV---------- 198
                |:....|:||.|||||.:.|.|.|:...||..     ..|:.::.|.|...          
  Rat   145 ----LNVAEAWELGYTGKGVTIGIMDDGIDYLHPDL-----AYNYNSDASYDFSSNDPYPYPRYT 200

  Fly   199 -----SHGTFVAGVI---ASSREC-LGFAPDADL---------YIFKVFTNSQVSYTSWFLDAFN 245
                 ||||..||.:   ||:..| :|.|.::.:         ::..:...|.:|:....:|   
  Rat   201 DDWFNSHGTRCAGEVSAAASNNICGVGVAYNSKVAGIRMLDQPFMTDIIEASSISHMPQLID--- 262

  Fly   246 YAIYRKINILNLSIGGPD---FMDSPFVEKVLELSANNV---------IMISAAGNDGPLYGTLN 298
                    |.:.|.|..|   .:|.| .|..|:..|:.|         |.:.|:| ||..|...|
  Rat   263 --------IYSASWGPTDNGKTVDGP-RELTLQAMADGVNKGRGGKGSIYVWASG-DGGSYDDCN 317

  Fly   299 NPGDQSDV--VGVGGIQFDDKIAKFSSRGMTTWELPLGYGRMGLDIVTYGSQVEGSDVRKGCR-R 360
            ..|..|.:  :.:.....|.:.|.:.....:|.......||..    ...:.|..:|:...|. |
  Rat   318 CDGYASSMWTISINSAINDGRTALYDESCSSTLASTFSNGRKR----NPEAGVATTDLYGNCTLR 378

  Fly   361 LSGTSVSSPVVAGAAALLISG----AFQKIDYINPASLKQVLIEGAEKLPHYNMFE---QGAGKL 418
            .||||.::|..||..||.:..    .::.:.::.      ||.....:| |..:.:   .|.|  
  Rat   379 HSGTSAAAPEAAGVFALALEANVDLTWRDMQHLT------VLTSKRNQL-HDEVHQWRRNGVG-- 434

  Fly   419 NLLKSMQLLLSYKPKITLIPAYLDFTQNYMWPYSSQPLYYGSSVAIANVTILNGISVTSHIVGIP 483
                                  |:|  |:::.|.  .|..|:.|.:|.                 
  Rat   435 ----------------------LEF--NHLFGYG--VLDAGAMVKMAK----------------- 456

  Fly   484 KW--IPD-FENQGQFLQVSAQVSPIVWPWTGWMSVFIAVKKEGENFEGVCKGSITLV--LESFKQ 543
            .|  :|: |...|..:|...::.|     ||.:.:.:..        ..|:|....|  ||..:.
  Rat   457 DWKTVPERFHCVGGSVQNPEKIPP-----TGKLVLTLQT--------NACEGKENFVRYLEHVQA 508

  Fly   544 --TTNETHVTEVDFPLTIKVTPKPPRNKRILWDQYHSLRYPPRYIPRDDLKVKLDPLDWRADH 604
              |.|.|...:::..:|     .|...|.||      |...||   .||.||..|...:...|
  Rat   509 VITVNATRRGDLNINMT-----SPMGTKSIL------LSRRPR---DDDSKVGFDKWPFMTTH 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S1PNP_649337.2 Peptidases_S8_SKI-1_like 154..407 CDD:173805 70/299 (23%)
DUF4350 610..754 CDD:464118
Pcsk2NP_036878.1 S8_pro-domain 32..108 CDD:465126 4/20 (20%)
Peptidases_S8_Protein_convertases_Kexins_Fur in-lik 121..417 CDD:173789 75/334 (22%)
P_proprotein 503..590 CDD:460225 19/69 (28%)
Blue background indicates that the domain is not in the aligned region.

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