DRSC/TRiP Functional Genomics Resources

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Protein Alignment S1P and Pcsk4

DIOPT Version :10

Sequence 1:NP_649337.2 Gene:S1P / 40399 FlyBaseID:FBgn0037105 Length:1012 Species:Drosophila melanogaster
Sequence 2:NP_598243.1 Gene:Pcsk4 / 171085 RGDID:620325 Length:654 Species:Rattus norvegicus


Alignment Length:433 Identity:89/433 - (20%)
Similarity:146/433 - (33%) Gaps:163/433 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 RLQTHPSVKAVVPQ---RSVRRILNYDA---YSNLTYIHRHPQGVLRNRNPNNDRHRQLCSVLHA 150
            ||:..|.|:....|   |.|:|.|....   :|...|:::..:..|                   
  Rat    89 RLKKEPKVRWFEQQTLRRRVKRSLVVPTDPWFSKQWYMNKEIEQDL------------------- 134

  Fly   151 NIL--WKLGITGKGVKVAIFDTGLTKNHPHFRNVKERTNWTNEKSL------------------D 195
            |||  |..|:||:||.|:|.|.|:.|:||..        |.|...|                  :
  Rat   135 NILKVWNQGLTGRGVVVSILDDGIEKDHPDL--------WANYDPLASYDFNDYDPDPQPRYTPN 191

  Fly   196 DRVSHGTFVAGVIASSRECLGFAPDADLYIFKVFTNSQVSYTSWFLDAFNYAIYRKINILNLSIG 260
            |...|||..||.::::..             ..|..:.|::                   |..||
  Rat   192 DENRHGTRCAGEVSATAN-------------NGFCGAGVAF-------------------NARIG 224

  Fly   261 GPDFMDSPFVEKV----LELSANNVIMISAAGN--------DGPLYGTLNNPGDQSDVV------ 307
            |...:|....:.|    |.|...::.:.||:..        |||  |.|.....:..|.      
  Rat   225 GVRMLDGAITDIVEAQSLSLQPQHIHIYSASWGPEDDGRTVDGP--GLLTQEAFRRGVTKGRQGL 287

  Fly   308 --------GVGGIQFDD-------------KIAKFSSRGMTTWELPLGYGR---------MGLDI 342
                    |.||:.:|:             .:...:.:|...|     |..         ....:
  Rat   288 GTLFIWASGNGGLHYDNCNCDGYTNSIHTLSVGSTTRQGRVPW-----YSEACASTFTTTFSSGV 347

  Fly   343 VTYGSQVEGSDVRKGCR-RLSGTSVSSPVVAGAAALLISG----AFQKIDYI-----NPASLK-- 395
            || ..|:..:|:...|. :.:|||.|:|:.||..||.:..    .::.:.::     .||.|:  
  Rat   348 VT-DPQIVTTDLHHQCTDKHTGTSASAPLAAGMIALALEANPLLTWRDLQHLVVRASRPAQLQAE 411

  Fly   396 --QVLIEGAEKLPHYNMFEQGAGKLN---LLKSMQLLLSYKPK 433
              ::...|.:...||     |.|.|:   |:...::.|..||:
  Rat   412 DWRINGVGRQVSHHY-----GYGLLDAGLLVDLARVWLPTKPQ 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S1PNP_649337.2 Peptidases_S8_SKI-1_like 154..407 CDD:173805 65/332 (20%)
DUF4350 610..754 CDD:464118
Pcsk4NP_598243.1 S8_pro-domain 34..110 CDD:465126 7/20 (35%)
Peptidases_S8_Protein_convertases_Kexins_Fur in-lik 115..404 CDD:173789 67/355 (19%)
P_proprotein 488..567 CDD:460225
Blue background indicates that the domain is not in the aligned region.

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