DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfAP-2 and tfap2b

DIOPT Version :9

Sequence 1:NP_001262178.1 Gene:TfAP-2 / 40398 FlyBaseID:FBgn0261953 Length:471 Species:Drosophila melanogaster
Sequence 2:XP_005160940.1 Gene:tfap2b / 550545 ZFINID:ZDB-GENE-050417-394 Length:457 Species:Danio rerio


Alignment Length:434 Identity:205/434 - (47%)
Similarity:261/434 - (60%) Gaps:64/434 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 HSG---HSS-----------THGSAATMHHQSLQSDFQPPYFPPPF----HHSTQSPPQQQISGY 100
            |.|   |||           .:.||..:.| :..|||||||||||:    :|.:|.|        
Zfish    30 HDGVPSHSSRLSQLGSVSQGPYSSAPPLSH-TPSSDFQPPYFPPPYQPLPYHQSQDP-------- 85

  Fly   101 LQNHGALEYLGTDPYGQPLSSLHHAPLHHYNQLAGLRSTQDQLGIHRTHREAELQGHVTQLSHGF 165
             .:|      .:|||.  |::||....|.:    |.|..||..|........:.:..:.|||.  
Zfish    86 -YSH------VSDPYS--LNALHQPQQHPW----GSRQRQDLQGTESGGLLPQPRASLPQLSG-- 135

  Fly   166 PYTDRRSDYGS-----AISAGAAHGTRLGHEHESLALHQALQNAVDDVQA--------PALDDNV 217
              .|.|.||.:     .:.....||...| ..:.|:|| .|.:.:|||||        ..||.:|
Zfish   136 --LDPRRDYSTVRRPDVLLHSTHHGLEAG-MGDGLSLH-GLAHGMDDVQAVEDLNGAMNILDQSV 196

  Fly   218 AFMSDLP--LIKSMKSGKEAGNIG--SGSPSEVFCAVPGRLSLLSSTSKYKVTIAEVQRRLSPPE 278
            .....:|  .:.|:...|: |.||  |.:.:||||:|||||||||||||||||:.||||||||||
Zfish   197 IKKVPVPHKSVASLMMNKD-GLIGGISVNVNEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPE 260

  Fly   279 CLNASLLGGVLRRAKSKNGGRLLREKLEKIGLNLPAGRRKAANVTLLTSLVEGEATHLAKDFHFV 343
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||.|||:||.::
Zfish   261 CLNASLLGGVLRRAKSKNGGRSLREKLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYI 325

  Fly   344 CETEFPARQLAEYIVRHQTEPQDSYRRKELILHSQQITKELMQILSQDRTTHFGTRSQHLLEPSM 408
            ||||||.:.::||:.|..|:|.:.:.||.::|.::|:.||...:|:||||....:|...:|||.:
Zfish   326 CETEFPTKAVSEYLNRQHTDPNELHSRKNMLLATKQLCKEFTDLLAQDRTPLGNSRPSPILEPGI 390

  Fly   409 QRHLTHFSLITHGFGSPAIMAVLHAFQTFLNESLNYLEKLYPSN 452
            |..|:|||.||||||||||.|.|.|.|.:|.|:|..|:|::.:|
Zfish   391 QSCLSHFSFITHGFGSPAICAALTALQNYLTEALKGLDKMFLNN 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfAP-2NP_001262178.1 TF_AP-2 247..441 CDD:397406 134/193 (69%)
tfap2bXP_005160940.1 TF_AP-2 227..425 CDD:281315 137/197 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596529
Domainoid 1 1.000 278 1.000 Domainoid score I1679
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 325 1.000 Inparanoid score I2463
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D287275at33208
OrthoFinder 1 1.000 - - FOG0000991
OrthoInspector 1 1.000 - - otm26176
orthoMCL 1 0.900 - - OOG6_105211
Panther 1 1.100 - - O PTHR10812
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X400
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.900

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