DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfAP-2 and tfap2a

DIOPT Version :9

Sequence 1:NP_001262178.1 Gene:TfAP-2 / 40398 FlyBaseID:FBgn0261953 Length:471 Species:Drosophila melanogaster
Sequence 2:XP_012819931.1 Gene:tfap2a / 395064 XenbaseID:XB-GENE-481201 Length:471 Species:Xenopus tropicalis


Alignment Length:486 Identity:212/486 - (43%)
Similarity:279/486 - (57%) Gaps:86/486 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RTNDHQFEDQKFMMERLSGHGSLGLSSGSAAYTTHSGGHTGRSGPATGHSGHSSTHGSAATMHHQ 70
            ||:|.......:..:....|.  |.|:|:|..            |..|..| .|.:.||..:.| 
 Frog    36 RTSDMDMSFPGYSQDSQDRHD--GTSNGTARL------------PQLGTVG-QSPYASAPPLSH- 84

  Fly    71 SLQSDFQPPYFPPPFHHSTQSPPQQQISGYLQNHGALEYLGTDPYGQPLSSLHHAPLHHYNQLAG 135
            :..:||||||||||:         |.|  |.|:.....:: .|||.  |::||..|...:....|
 Frog    85 TPNADFQPPYFPPPY---------QPI--YPQSQDPYSHV-NDPYS--LNALHTQPQPQHPGWPG 135

  Fly   136 LRSTQDQLGIHRTHREAELQGHVTQLSHGFPY----TDRRSDY---------GSAISAGAAHGTR 187
            .|.:|:...:| |||             |.|:    .|.|.||         ...:|:|      
 Frog   136 QRQSQETSLLH-THR-------------GIPHQLSGLDPRRDYRRHEDLLHGPHGLSSG------ 180

  Fly   188 LGHEHESLALHQALQNAVDDV---QAPAL---DDNVAFMSDLPLIKSMKSGKEA-----GNIGSG 241
            ||    .|.|| ::.:.::||   :.|::   |..|.....:.|.||..:...:     .|:..|
 Frog   181 LG----DLPLH-SIPHGIEDVSHIEDPSINIPDQTVIKKGPVSLSKSNNNAVSSLSLNKDNLFGG 240

  Fly   242 --SPSEVFCAVPGRLSLLSSTSKYKVTIAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRLLREK 304
              :|:||||:|||||||||||||||||:||||||||||||||||||||||||||||||||.||||
 Frog   241 VVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREK 305

  Fly   305 LEKIGLNLPAGRRKAANVTLLTSLVEGEATHLAKDFHFVCETEFPARQLAEYIVRHQTEPQDSYR 369
            |:|||||||||||||||||||||||||||.|||:||.:||||||||:.:.||:.|..::|.:...
 Frog   306 LDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAIGEYVNRQHSDPNEQVT 370

  Fly   370 RKELILHSQQITKELMQILSQDRTTHFGTRSQHLLEPSMQRHLTHFSLITHGFGSPAIMAVLHAF 434
            ||.::|.::||.||...:|||||:....:|...:|||.:|..||||:||:|||||||:.|.:.|.
 Frog   371 RKNMLLATKQICKEFTDLLSQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAITAL 435

  Fly   435 QTFLNESLNYLEKLYPSNGGGMVSSSLDKSK 465
            |.:|.|:|..::|:|.:|     :|..|.||
 Frog   436 QNYLTEALKAMDKMYLNN-----NSHTDNSK 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfAP-2NP_001262178.1 TF_AP-2 247..441 CDD:397406 134/193 (69%)
tfap2aXP_012819931.1 TF_AP-2 246..446 CDD:281315 138/199 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 277 1.000 Domainoid score I1688
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H2421
Inparanoid 1 1.050 338 1.000 Inparanoid score I2326
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D287275at33208
OrthoFinder 1 1.000 - - FOG0000991
OrthoInspector 1 1.000 - - otm48084
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10438
SonicParanoid 1 1.000 - - X400
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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