DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TfAP-2 and tfap2e

DIOPT Version :9

Sequence 1:NP_001262178.1 Gene:TfAP-2 / 40398 FlyBaseID:FBgn0261953 Length:471 Species:Drosophila melanogaster
Sequence 2:XP_021323693.1 Gene:tfap2e / 393794 ZFINID:ZDB-GENE-040426-1455 Length:432 Species:Danio rerio


Alignment Length:467 Identity:214/467 - (45%)
Similarity:271/467 - (58%) Gaps:81/467 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GLSSGSAAYTTHSGGHTGRSGPATGHSGHSSTHGSAATMHHQSLQSDFQPPYFPPPFHHSTQSPP 93
            ||||.|      .||...:....     :.:.:.||..:.| :..|||||||||||:..|:.|..
Zfish    20 GLSSSS------PGGRLSQLSQL-----NQAAYSSAPPLCH-TPASDFQPPYFPPPYPQSSLSYS 72

  Fly    94 QQQISGYLQNHGALEYLGTDPY-GQPLSSLHHAPLHHYNQLA--GLRSTQDQLG-IHRTHR---- 150
            |.|..||             |: .:|..||:  .||.:.|.|  ..||..:..| :.:.||    
Zfish    73 QSQDGGY-------------PHLPEPYPSLN--SLHQHQQAAWHSQRSRSEDAGLLSQPHRALSL 122

  Fly   151 --EAELQGHVTQLSHGFPYTDRRSDYGSAISAGAAHGTRLGHEHESLALHQALQNAVDDVQ---- 209
              ..|..|....|:||.      .|..:|:..|            .|.:| |:.:.:||:|    
Zfish   123 DPRREYPGVPRLLTHGL------GDGAAALGDG------------PLGMH-AVHHGLDDIQGLEE 168

  Fly   210 APA---LDDNVAFMSDLP------LIKSMKSGKEAGNIGS-GSPSEVFCAVPGRLSLLSSTSKYK 264
            |.|   ||.:|.....||      .|.::...||...:|. .:|:||||:|||||||||||||||
Zfish   169 ASALGILDHSVIKKVPLPSKLNGSTISALSLSKEGLGLGGVSNPAEVFCSVPGRLSLLSSTSKYK 233

  Fly   265 VTIAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRLLREKLEKIGLNLPAGRRKAANVTLLTSLV 329
            ||:.||||||:||||||||||||||||||||||||.|||:||||||||||||||||||||||:||
Zfish   234 VTVGEVQRRLAPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLNLPAGRRKAANVTLLTALV 298

  Fly   330 EGEATHLAKDFHFVCETEFPARQLAEYIVRHQTEPQDSYRRKELILHSQQITKELMQILSQDRTT 394
            ||||.|||:||.:|||||||||..|||:.| ||||.....|:.::|.:::|.||.:.::||||:.
Zfish   299 EGEAVHLARDFGYVCETEFPARATAEYLCR-QTEPDQLPTRRSMLLATKEICKEFVDLMSQDRSP 362

  Fly   395 HFGTRSQHLLEPSMQRHLTHFSLITHGFGSPAIMAVLHAFQTFLNESLNYLEKLYPSNGGGMVSS 459
            ...:|....|||.:|..||||||:|||||:||:.|.|.|||::|.|:|..|:|  ..|||     
Zfish   363 LGASRPTPCLEPGVQSSLTHFSLLTHGFGTPALCAALSAFQSYLLEALKLLDK--GENGG----- 420

  Fly   460 SLDKSKIDNEKK 471
               |:..|.|.|
Zfish   421 ---KNHHDKELK 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfAP-2NP_001262178.1 TF_AP-2 247..441 CDD:397406 135/193 (70%)
tfap2eXP_021323693.1 TF_AP-2 216..409 CDD:308749 135/193 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596532
Domainoid 1 1.000 278 1.000 Domainoid score I1679
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 325 1.000 Inparanoid score I2463
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D287275at33208
OrthoFinder 1 1.000 - - FOG0000991
OrthoInspector 1 1.000 - - otm26176
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10812
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10438
SonicParanoid 1 1.000 - - X400
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1111.030

Return to query results.
Submit another query.