DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TfAP-2 and Tfap2e

DIOPT Version :9

Sequence 1:NP_001262178.1 Gene:TfAP-2 / 40398 FlyBaseID:FBgn0261953 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_945198.2 Gene:Tfap2e / 332937 MGIID:2679630 Length:442 Species:Mus musculus


Alignment Length:499 Identity:220/499 - (44%)
Similarity:269/499 - (53%) Gaps:111/499 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 MERLSGHGSLGLSSG--------SAAYTTHSGGHTGRSGPATGHSGHSSTHGSAATMHHQSLQSD 75
            |||..|   ||.::|        .|||           |||.     ...|..||     |..:|
Mouse     9 MERPDG---LGAAAGGTRLSSLPQAAY-----------GPAP-----PLCHTPAA-----SATAD 49

  Fly    76 FQPPYFPPPFHHSTQSPPQQQISGYLQN---HGALEYLGTDPYG--------QPLSSLHHAP--- 126
            :.|||||||:       ||..:. |.|.   ..|..:|..||||        ||..:...||   
Mouse    50 YHPPYFPPPY-------PQAPLP-YGQGPDATAAFPHLAADPYGGLAPLAQPQPPQAAWAAPRAA 106

  Fly   127 LHHYNQLAGLRSTQDQ-LGIHRTHREAELQGHVTQLSHGFPYTDRRSDYGSAIS------AGAAH 184
            ...:::..||.:...: ||:                       |.|.||.:|:.      |..||
Mouse   107 ARAHDEPPGLLAPPARALGL-----------------------DPRRDYAAAVPRLLHSLADGAH 148

  Fly   185 G---TRLGHEHESLALHQALQ--NAVDDVQAPALDDNVAFMSDLPLIKSMKSGKEAGNI------ 238
            |   ..||  ...||....|:  .|:||.....||.:|        ||.:....:||::      
Mouse   149 GLADAPLG--LPGLAEPPGLEELQAIDDPGMSLLDQSV--------IKKVPIPSKAGSLSTLALS 203

  Fly   239 ------GSGSPSEVFCAVPGRLSLLSSTSKYKVTIAEVQRRLSPPECLNASLLGGVLRRAKSKNG 297
                  |..:||||||:|||||||||||||||||:.|||||||||||||||||||||||||||||
Mouse   204 KDSLVGGISNPSEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNG 268

  Fly   298 GRLLREKLEKIGLNLPAGRRKAANVTLLTSLVEGEATHLAKDFHFVCETEFPARQLAEYIVRHQT 362
            ||.|||:|||||||||||||||||||||||||||||.|||:||.:||||||||:..|||:.|...
Mouse   269 GRCLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAAAEYLCRQHA 333

  Fly   363 EPQDSYRRKELILHSQQITKELMQILSQDRTTHFGTRSQHLLEPSMQRHLTHFSLITHGFGSPAI 427
            :|.:.:.||.::|.::||.||...:::|||:....:|...:|||.:|..||||||||||||.|||
Mouse   334 DPGELHSRKSMLLAAKQICKEFADLMAQDRSPLGNSRPALILEPGVQSCLTHFSLITHGFGGPAI 398

  Fly   428 MAVLHAFQTFLNESLNYLEKLYPSNGGGMVSSSLDKSKIDNEKK 471
            .|.|.|||.:|.|||..|||::.|..||....|....|....:|
Mouse   399 CAALTAFQNYLLESLKGLEKMFLSGAGGGHGESKASEKDTKHRK 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfAP-2NP_001262178.1 TF_AP-2 247..441 CDD:397406 136/193 (70%)
Tfap2eNP_945198.2 PPxY motif. /evidence=ECO:0000255 54..59 4/4 (100%)
TF_AP-2 216..414 CDD:281315 140/197 (71%)
H-S-H (helix-span-helix), dimerization. /evidence=ECO:0000255 287..417 75/129 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850562
Domainoid 1 1.000 277 1.000 Domainoid score I1710
eggNOG 1 0.900 - - E1_KOG3811
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 324 1.000 Inparanoid score I2473
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D287275at33208
OrthoFinder 1 1.000 - - FOG0000991
OrthoInspector 1 1.000 - - otm42961
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10812
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10438
SonicParanoid 1 1.000 - - X400
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.930

Return to query results.
Submit another query.