DRSC/TRiP Functional Genomics Resources

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Protein Alignment TfAP-2 and Tfap2d

DIOPT Version :9

Sequence 1:NP_001262178.1 Gene:TfAP-2 / 40398 FlyBaseID:FBgn0261953 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001366002.1 Gene:Tfap2d / 226896 MGIID:2153466 Length:456 Species:Mus musculus


Alignment Length:474 Identity:201/474 - (42%)
Similarity:264/474 - (55%) Gaps:88/474 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RLSGHGSL-GLSSGSAAYT-----THSGGHTGRSGPATGHSGHSSTHGSAATMHHQSLQSDFQ-- 77
            ||...|.| .:::.:.||:     |:|...|..:.|      :.||:.....:||||...:||  
Mouse    27 RLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASP------YFSTNHQYTPLHHQSFHYEFQHS 85

  Fly    78 -PPYFPPPF-----HHSTQSPPQQQISGYLQNHGALEYLGTDPYGQPLSSLHHAPLHHYNQLAG- 135
             |...|..:     |||.|.        |.|.|          :|:|...::   ||:...|.. 
Mouse    86 HPAVTPDAYSLNSLHHSQQY--------YQQIH----------HGEPTDFIN---LHNARALKSS 129

  Fly   136 -LRSTQDQLGIHRTHREAELQGHVTQLSHGFPY---TDRRSDYGSAISAGAAHGTRLGHEHESLA 196
             |...:.:||....:|..:|    :.:|||..|   .|:|...|.::...||             
Mouse   130 CLDEQRRELGCLDAYRRHDL----SLMSHGSQYGMHPDQRLLPGPSLGLAAA------------- 177

  Fly   197 LHQALQNAVDDVQAPALDDNVAFMSDLPLIKSMKSGKEAGNIGSG-----SPSEVFCAVPGRLSL 256
                   ..||:|.     :|.....:.|      ..:.|.|..|     :|:::||:|||||||
Mouse   178 -------GADDLQG-----SVEAQCGIVL------NGQGGVIRRGGTCVVNPTDLFCSVPGRLSL 224

  Fly   257 LSSTSKYKVTIAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRLLREKLEKIGLNLPAGRRKAAN 321
            ||||||||||||||:||||||||||||||||:|||||||||||.|||||:::|||||||||||||
Mouse   225 LSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAAN 289

  Fly   322 VTLLTSLVEGEATHLAKDFHFVCETEFPARQLAEYIVRHQTEPQDSYRRKELILHSQQITKELMQ 386
            ||||||||||||.|||:||.:.|||||||:.:.|::.|...|.::...||::||.::||.||...
Mouse   290 VTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQD 354

  Fly   387 ILSQDRTTHFGTRSQHLLEPSMQRHLTHFSLITHGFGSPAIMAVLHAFQTFLNESLNYLEKLYPS 451
            :|||||:....:|...:|:..:|||||||||||||||:|||.|.|..|||.|:|.||||||....
Mouse   355 LLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTTH 419

  Fly   452 NGGGMVSSSLDKSKIDNEK 470
            ..||...|.  :...::||
Mouse   420 KNGGAADSG--QGHANSEK 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfAP-2NP_001262178.1 TF_AP-2 247..441 CDD:397406 134/193 (69%)
Tfap2dNP_001366002.1 TF_AP-2 215..409 CDD:397406 134/193 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850560
Domainoid 1 1.000 277 1.000 Domainoid score I1710
eggNOG 1 0.900 - - E1_KOG3811
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 324 1.000 Inparanoid score I2473
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D287275at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42961
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10812
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X400
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.860

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